RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 GJE1A6NN92 205 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 MT-CO3P00414 261 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 FKBP2P26885 142 aaKnown RBP12.84□□□□□ -0.35
SF1-211ENST00000448404 MPGP29372 298 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 RAB35Q15286 201 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 SP6Q3SY56 376 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 MOB3CQ70IA8 216 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 TMEM17Q86X19 198 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 FBXL14Q8N1E6 418 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 IL22RA1Q8N6P7 574 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 OR51F2Q8NH61 342 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 MITD1Q8WV92 249 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 TOMM40LQ969M1 308 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
SF1-211ENST00000448404 SULT4A1Q9BR01 284 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
SF1-211ENST00000448404 PIEZO2Q9H5I5 2752 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 MSGN1A6NI15 193 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 H0YIZ8 118 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 MRPL33O75394 65 aaKnown RBP12.84□□□□□ -0.35
SF1-211ENST00000448404 FGF2P09038 288 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 GSK3AP49840 483 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 LHX2P50458 406 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 FAM3AP98173 230 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 PLGLB1Q02325 96 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 RSU1Q15404 277 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 H3F3CQ6NXT2 135 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 PHB2Q99623 299 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
SF1-211ENST00000448404 ZNF850A8MQ14 1090 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 LILRA1O75019 489 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CYC1P08574 325 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CNR1P21554 472 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 FXYD4P59646 89 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 ABLIM2Q6H8Q1 611 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 C11orf87Q6NUJ2 197 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 Q6ZPA2 131 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 OR2W3Q7Z3T1 314 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 LINC00469Q8N7U9 141 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 AK3Q9UIJ7 227 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 ARGFXA6NJG6 315 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 HMSDA8MTL9 139 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CSTBP04080 98 aaKnown RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 CD79AP11912 226 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CLDN18P56856 261 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 GMFBP60983 142 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 CHRFAM7AQ494W8 412 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 PLCXD3Q63HM9 321 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 ELP2Q6IA86 826 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 NUFIP2Q7Z417 695 aaKnown RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 PAPOLGQ9BWT3 736 aaKnown RBP12.83□□□□□ -0.36
SF1-211ENST00000448404 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
SF1-211ENST00000448404 C5orf49A4QMS7 147 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 OR6C6A6NF89 314 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 NRASP01111 189 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 C4BPBP20851 252 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 AKR1C2P52895 323 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 HOXA4Q00056 320 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 AKR1C1Q04828 323 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 RIPPLY1Q0D2K3 151 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 BORCS8Q96FH0 119 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 LRRC46Q96FV0 321 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 ZNF2Q9BSG1 426 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 SF3B5Q9BWJ5 86 aaKnown RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 COMMD9Q9P000 198 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 ICE1Q9Y2F5 2266 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 IL2RAP01589 272 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 SPATA46Q5T0L3 261 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 CDH26Q8IXH8 852 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 ZSCAN4Q8NAM6 433 aaPredicted RBP12.82□□□□□ -0.36
SF1-211ENST00000448404 CPT1CQ8TCG5 803 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 KCNE4Q8WWG9 221 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 PP6455Q8WZ26 134 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 FBLN5Q9UBX5 448 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 PRSS50Q9UI38 385 aa12.82□□□□□ -0.36
SF1-211ENST00000448404 CYTIPO60759 359 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 NR2C1P13056 603 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 MRPS24Q96EL2 167 aaKnown RBP12.81□□□□□ -0.36
SF1-211ENST00000448404 Q96M66 194 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 ZNF488Q96MN9 340 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 TNFSF18Q9UNG2 199 aa12.81□□□□□ -0.36
SF1-211ENST00000448404 TIMM10BQ9Y5J6 103 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms