RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 USE1Q9NZ43 259 aa14.49□□□□□ -0.09
DDX56-207ENST00000448192 ZNRD1Q9P1U0 126 aa14.49□□□□□ -0.09
DDX56-207ENST00000448192 TRRAPQ9Y4A5 3859 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 BTBD17A6NE02 478 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 INMTO95050 263 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 SERPINA3P01011 423 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 MPZP25189 248 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 ALDH3A2P51648 485 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 RPL15P61313 204 aaKnown RBP14.48□□□□□ -0.09
DDX56-207ENST00000448192 RPL31P62899 125 aaKnown RBP14.48□□□□□ -0.09
DDX56-207ENST00000448192 PRR31Q5SQ13 230 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 OLFML2AQ68BL7 652 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 C17orf107Q6ZR85 190 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 RDH10Q8IZV5 341 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 CBR4Q8N4T8 237 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 OR4M1Q8NGD0 313 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 OR5D13Q8NGL4 314 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 PKIBQ9C010 78 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 ZNF696Q9H7X3 374 aa14.48□□□□□ -0.09
DDX56-207ENST00000448192 LOC107986453A0A1B0GWG9 222 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 DAPL1A0PJW8 107 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 CLPSL1A2RUU4 121 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 ANGPTL7O43827 346 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 GATBO75879 557 aaKnown RBP14.47□□□□□ -0.09
DDX56-207ENST00000448192 UBCP0CG48 685 aaKnown RBP14.47□□□□□ -0.09
DDX56-207ENST00000448192 KIR3DL2P43630 455 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 FUT6P51993 359 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 ISL1P61371 349 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 SNRPGP62308 76 aaKnown RBP14.47□□□□□ -0.09
DDX56-207ENST00000448192 ACTC1P68032 377 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 ACTA1P68133 377 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 SRSF4Q08170 494 aaKnown RBP14.47□□□□□ -0.09
DDX56-207ENST00000448192 ACSM1Q08AH1 577 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 IL24Q13007 206 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 TAF9Q16594 264 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 MEDAGQ5VYS4 303 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 TMEM200BQ69YZ2 307 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 GDPGP1Q6ZNW5 385 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 CCDC54Q8NEL0 328 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 WFDC12Q8WWY7 111 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 CHST5Q9GZS9 411 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 HES4Q9HCC6 221 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 AASSQ9UDR5 926 aa14.47□□□□□ -0.09
DDX56-207ENST00000448192 SF3B6Q9Y3B4 125 aaKnown RBP14.47□□□□□ -0.09
DDX56-207ENST00000448192 IGKV1-27A0A075B6S5 117 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 A0A1W2PPH5 198 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 TK1P04183 234 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 ERVK11-1P61568 191 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 OCLNQ16625 522 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 SLC25A30Q5SVS4 291 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 MKXQ8IYA7 352 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 C10orf67Q8IYJ2 551 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 ASCC1Q8N9N2 400 aaKnown RBP14.46□□□□□ -0.09
DDX56-207ENST00000448192 OR2G2Q8NGZ5 317 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 SLAMF9Q96A28 289 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 BORCS8Q96FH0 119 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 CEP19Q96LK0 163 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 MTCH1Q9NZJ7 389 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 VPREB3Q9UKI3 123 aa14.46□□□□□ -0.09
DDX56-207ENST00000448192 MGAM2Q2M2H8 2515 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 SNTNA6NMZ2 147 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 F8VVB4 439 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 F8VWA3 439 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 PIPP12273 146 aaPredicted RBP14.45□□□□□ -0.1
DDX56-207ENST00000448192 OR12D2P58182 307 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 COL10A1Q03692 680 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 CNN3Q15417 329 aaKnown RBP14.45□□□□□ -0.1
DDX56-207ENST00000448192 TMEM244Q5VVB8 128 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 HCP5Q6MZN7 132 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 SLC25A26Q70HW3 274 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 KCTD20Q7Z5Y7 419 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 PP6455Q8WZ26 134 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 RNF166Q96A37 237 aaPredicted RBP14.45□□□□□ -0.1
DDX56-207ENST00000448192 C10orf35Q96D05 121 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 MBOAT4Q96T53 435 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 FRRS1LQ9P0K9 344 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 RNF114Q9Y508 228 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 GMPPBQ9Y5P6 360 aa14.45□□□□□ -0.1
DDX56-207ENST00000448192 hCG_1809904A0A1W2PP81 198 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 A0A1W2PPE2 198 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 A0A1W2PR64 198 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 A0A1W2PRV1 198 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 J3QLW9 94 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 J3QRE1 110 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 SLC16A6O15403 523 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 CCL3L1P16619 93 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 ZNF19P17023 458 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 ZNF20P17024 532 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 RBP2P50120 134 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 MIDNQ504T8 468 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 DHRS7BQ6IAN0 325 aaPredicted RBP14.44□□□□□ -0.1
DDX56-207ENST00000448192 BRICD5Q6PL45 260 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 EGFL6Q8IUX8 553 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 ACBD7Q8N6N7 88 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 LINC01006Q8NI28 216 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 C17orf50Q8WW18 174 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 FGGYQ96C11 551 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 ADAT3Q96EY9 351 aaPredicted RBP14.44□□□□□ -0.1
DDX56-207ENST00000448192 FAM234AQ9H0X4 552 aa14.44□□□□□ -0.1
DDX56-207ENST00000448192 HEXA-AS1Q9H8Q6 139 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms