RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 HTR2CP28335 458 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 RAB11BQ15907 218 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 ZNF181Q2M3W8 571 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 AVPI1Q5T686 147 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 AWAT2Q6E213 333 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 FAM166AQ6J272 317 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 GLIPR1L1Q6UWM5 242 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 USP43Q70EL4 1123 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR6M1Q8NGM8 313 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC25A28Q96A46 364 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 CEP19Q96LK0 163 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 BCL7BQ9BQE9 202 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 CHODLQ9H9P2 273 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 SMURF1Q9HCE7 757 aa15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 RSL24D1Q9UHA3 163 aaKnown RBP15.12■□□□□ 0.01
TRAPPC4-203ENST00000447216 CCDC168Q8NDH2 2452 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SMIM31A0A1B0GVY4 71 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 IFITM5A6NNB3 132 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SRRM5B3KS81 715 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 IFNL4K9M1U5 179 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC22A1O15245 554 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 PPIHO43447 177 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 LHBP01229 141 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 GLRA1P23415 457 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 CFHR2P36980 270 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 PDLIM4P50479 330 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 PSMD7P51665 324 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 RSU1Q15404 277 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SFRP4Q6FHJ7 346 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SFXN4Q6P4A7 337 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 ASCL4Q6XD76 172 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 SAXO1Q8IYX7 474 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 C1orf87Q8N0U7 546 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 ZSCAN4Q8NAM6 433 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 DEFB108BQ8NET1 73 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 PXT1Q8NFP0 134 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 C1orf147Q96MC9 270 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 NRIP2Q9BQI9 281 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 DAPK2Q9UIK4 370 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 DOCK11Q5JSL3 2073 aa15.11■□□□□ 0.01
TRAPPC4-203ENST00000447216 NOTCH2Q04721 2471 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 A0A1W2PP11 408 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 CLDN25C9JDP6 229 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 KDM4BO94953 1096 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 NXPH2O95156 264 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 HTR3BO95264 441 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 SFTPBP07988 381 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 SNU13P55769 128 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 ERVK11-1P61568 191 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 RIN1Q13671 783 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC22A6Q4U2R8 563 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 LRRC75A-AS1Q8N1F1 130 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 S100A13Q99584 98 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 BARHL1Q9BZE3 327 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 METTL9Q9H1A3 318 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 IL36RNQ9UBH0 155 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 STEAP1Q9UHE8 339 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 NPTNQ9Y639 398 aa15.1■□□□□ 0.01
TRAPPC4-203ENST00000447216 A6NHS1 94 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 AIPO00170 330 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 NOS1APO75052 506 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 TFF1P04155 84 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 PRKACAP17612 351 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 SERPINA2P20848 420 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 ZMYND11Q15326 602 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 IDNKQ5T6J7 187 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR10K2Q6IF99 312 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 CLEC2AQ6UVW9 174 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 ACP7Q6ZNF0 438 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR51D1Q8NGF3 324 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 OR5T2Q8NGG2 359 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 TBC1D15Q8TC07 691 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 FAM168AQ92567 244 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 EMG1Q92979 244 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 SLC25A46Q96AG3 418 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 BANF2Q9H503 90 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 MYOZ1Q9NP98 299 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 NDUFA13Q9P0J0 144 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 WIPI2Q9Y4P8 454 aa15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 MAP1AP78559 2803 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC4-203ENST00000447216 PPIAL4EA0A075B759 164 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 PPIAL4DF5H284 164 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 LGALS8O00214 317 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 ACAA1P09110 424 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-203ENST00000447216 PPIAL4FP0DN26 164 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 SNRPBP14678 240 aaKnown RBP15.08■□□□□ 0
TRAPPC4-203ENST00000447216 GPR6P46095 362 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-203ENST00000447216 BTG1P62324 171 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 DGUOKQ16854 277 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 CLEC12BQ2HXU8 276 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 Q5PR19 223 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 METAP1DQ6UB28 335 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-203ENST00000447216 FAM58AQ8N1B3 248 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 TMEM104Q8NE00 496 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 C10orf105Q8TEF2 133 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 FAM46BQ96A09 425 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 FAM3DQ96BQ1 224 aa15.08■□□□□ 0
TRAPPC4-203ENST00000447216 HES4Q9HCC6 221 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms