RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 THEM4Q5T1C6 240 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 APCDD1LQ8NCL9 501 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR4A16Q8NH70 328 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 LMX1AQ8TE12 382 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 AQP3Q92482 292 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 LRP12Q9Y561 859 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SCN5AQ14524 2016 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 P2RY2P41231 377 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 CNN3Q15417 329 aaKnown RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 TMEM52BQ4KMG9 183 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 TMEM183AQ8IXX5 376 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 GJC3Q8NFK1 279 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR10G8Q8NGN5 311 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 KLK13Q9UKR3 277 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 EIF4E2O60573 245 aaKnown RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 TRAPPC2LQ9UL33 140 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SHISA3A0PJX4 238 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ERVS71-1P61550 626 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SAPCD1Q5SSQ6 148 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ZNF813Q6ZN06 617 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ZNF793Q6ZN11 406 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SUCLG1P53597 346 aaKnown RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 ADAMTS17Q8TE56 1095 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PTPMT1Q8WUK0 201 aaPredicted RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR5R1Q8NH85 324 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 MRPL24Q96A35 216 aaKnown RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 AQP10Q96PS8 301 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SGIP1Q9BQI5 828 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 OR2J1Q9GZK6 312 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 GAL3ST2Q9H3Q3 398 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 A6NDN8 102 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 HMGA1P17096 107 aaKnown RBP7.03□□□□□ -1.28
SMG1-202ENST00000446231 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 HIPK2Q9H2X6 1198 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 NR0B2Q15466 257 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 GFI1BQ5VTD9 330 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 RAET1LQ5VY80 246 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 MOB1BQ7L9L4 216 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 FGF13Q92913 245 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 LBX1P52954 281 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 ZNF542PQ5EBM4 170 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PRR27Q6MZM9 219 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 UNQ9370/PRO34162Q6UXP9 181 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 PGLYRP3Q96LB9 341 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 MSL2Q9HCI7 577 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 SRPK3Q9UPE1 567 aa7.03□□□□□ -1.28
SMG1-202ENST00000446231 HSPB1P04792 205 aaKnown RBP7.02□□□□□ -1.28
SMG1-202ENST00000446231 HOXA6P31267 233 aa7.02□□□□□ -1.28
SMG1-202ENST00000446231 CRYBA2P53672 197 aa7.02□□□□□ -1.28
SMG1-202ENST00000446231 PMP22Q01453 160 aa7.02□□□□□ -1.28
SMG1-202ENST00000446231 GALNT14Q96FL9 552 aa7.02□□□□□ -1.28
SMG1-202ENST00000446231 KIAA1456Q9P272 454 aa7.02□□□□□ -1.28
SMG1-202ENST00000446231 ACAA2P42765 397 aaKnown RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 ZNF121P58317 390 aaPredicted RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 DPTQ07507 201 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 ASTLQ6HA08 431 aaPredicted RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 SPNS3Q6ZMD2 512 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 OR52N5Q8NH56 324 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 FAM117AQ9C073 453 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 C19orf25Q9UFG5 118 aaPredicted RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 H0YL77 283 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 VAX1Q5SQQ9 334 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 CDC20BQ86Y33 519 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 MOB1AQ9H8S9 216 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 TRBV5-5A0A0J9YX44 114 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 TNFRSF10CO14798 259 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 NRASP01111 189 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 KRASP01116 189 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 CHRNB4P30926 498 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 K7ERU9 68 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 FAM157BP0CG42 384 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 RUNX2Q13950 521 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 EID2BQ96D98 161 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 WDR87Q6ZQQ6 2873 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 LINC01553A4QN01 128 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 S100A7P31151 101 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 NANOS3P60323 173 aaKnown RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 SMAD4Q13485 552 aaKnown RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 ISXQ2M1V0 245 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 ARSJQ5FYB0 599 aaPredicted RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 FAM3AP98173 230 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 TMEM156Q8N614 296 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 C16orf52Q8NHV5 167 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 CALHM2Q9HA72 323 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 YBX2Q9Y2T7 364 aaKnown RBP7.02□□□□□ -1.29
SMG1-202ENST00000446231 CDC14CA4D256 554 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 PITX3O75364 302 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 C20orf196Q8IYI0 205 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 DHRS7CA6NNS2 312 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 C11orf94C9JXX5 98 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 RAMP1O60894 148 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 CD1CP29017 333 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 PRTGQ2VWP7 1150 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 MPPED1O15442 326 aa7.02□□□□□ -1.29
SMG1-202ENST00000446231 PRSS53Q2L4Q9 553 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms