RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	CDC42EP3	Q9UKI2	254 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	HHLA2	Q9UM44	414 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	DAPP1	Q9UN19	280 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	HCFC2	Q9Y5Z7	792 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	TRBV24-1	A0A075B6N3	115 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	TRBV5-3	A0A0A0MS03	114 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	TLCD2	A6NGC4	264 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	MSGN1	A6NI15	193 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329		J3KTA2	159 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	SLC31A1	O15431	190 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	VENTX	O95231	258 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	CELA3A	P09093	270 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	IGLC1	P0CG04	106 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	RPL38	P63173	70 aa	Known RBP	5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	GNG3	P63215	75 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	ASCL4	Q6XD76	172 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	CEACAM19	Q7Z692	300 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	KRTCAP2	Q8N6L1	136 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	PNPLA1	Q8N8W4	532 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	SLC16A11	Q8NCK7	471 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	OR4K1	Q8NGD4	311 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	LYPD6B	Q8NI32	183 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	C1orf216	Q8TAB5	229 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	RARRES2	Q99969	163 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	P2RY12	Q9H244	342 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	PPDPF	Q9H3Y8	114 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	ASIC5	Q9NY37	505 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	PLA2G2E	Q9NZK7	142 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	KLK14	Q9P0G3	267 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	HSPB8	Q9UJY1	196 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	LAMP3	Q9UQV4	416 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	PDCD11	Q14690	1871 aa	Known RBP	5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	CKAP5	Q14008	2032 aa		5.99	□□□□□ -1.45
TRIM6-205	ENST00000445329	CHD9	Q3L8U1	2897 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329		A0A1B0GUS0	222 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	C13orf42	A0A1B0GVH6	325 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	IGSF23	A1L1A6	192 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	DCDC2B	A2VCK2	349 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	GAGE10	A6NGK3	116 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	GPR39	O43194	453 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ERI3	O43414	337 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ZNF207	O43670	478 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	RAD51D	O75771	328 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	CEACAM4	O75871	244 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TTR	P02766	147 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	OPN1SW	P03999	348 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	FURIN	P09958	794 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ACP5	P13686	325 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	AOAH	P28039	575 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	NSG1	P42857	185 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	WDR5	P61964	334 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	RAB40B	Q12829	278 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ZNF585B	Q52M93	769 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ACSM3	Q53FZ2	586 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TMEM69	Q5SWH9	247 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ARL9	Q6T311	187 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329		Q6ZSR9	355 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329		Q6ZWC4	215 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	UEVLD	Q8IX04	471 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TCTEX1D1	Q8N7M0	179 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TMEM170A	Q8WVE7	144 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	STARD4	Q96DR4	205 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	MS4A6E	Q96DS6	147 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	LMLN	Q96KR4	655 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	SNRNP25	Q9BV90	132 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	VN1R1	Q9GZP7	353 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	A4GALT	Q9NPC4	353 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	MRPS16	Q9Y3D3	137 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	HEATR5A	Q86XA9	2040 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ETV2	O00321	342 aa	Predicted RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	HLA-A	P01891	365 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	C4BPA	P04003	597 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	CTSL	P07711	333 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	OSM	P13725	252 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	IGFBP6	P24592	240 aa	Predicted RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	AK4	P27144	223 aa	Predicted RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	GATA4	P43694	442 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	DNASE1L1	P49184	302 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	RPL24	P83731	157 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	SCAP	Q12770	1279 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	HIST3H3	Q16695	136 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	NRN1L	Q496H8	165 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	ZNF766	Q5HY98	468 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	OLIG3	Q7RTU3	272 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TSEN54	Q7Z6J9	526 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TMEM256	Q8N2U0	113 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	FNDC9	Q8TBE3	224 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	PTH2	Q96A98	100 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	NAA38	Q9BRA0	125 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	PLK3	Q9H4B4	646 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	IL23A	Q9NPF7	189 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	MRPL16	Q9NX20	251 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	AK6	Q9Y3D8	172 aa	Known RBP	5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	RALGAPA2	Q2PPJ7	1873 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	TSC2	P49815	1807 aa		5.98	□□□□□ -1.45
TRIM6-205	ENST00000445329	IRGM	A1A4Y4	181 aa		5.97	□□□□□ -1.45
TRIM6-205	ENST00000445329	PRSS37	A4D1T9	235 aa		5.97	□□□□□ -1.45
TRIM6-205	ENST00000445329	B3GALT4	O96024	378 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms