RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
SEC13-213ENST00000445064 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
SEC13-213ENST00000445064 RAB18Q9NP72 206 aa12.51□□□□□ -0.41
SEC13-213ENST00000445064 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
SEC13-213ENST00000445064 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
SEC13-213ENST00000445064 V9GYS6 101 aa12.51□□□□□ -0.41
SEC13-213ENST00000445064 M0R129 80 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 HOXB6P17509 224 aaKnown RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 FLOT2Q14254 428 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 HABP2Q14520 560 aaPredicted RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 BCL2L15Q5TBC7 163 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 CCBE1Q6UXH8 406 aaPredicted RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 MEPCEQ7L2J0 689 aaKnown RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 NPFFR1Q9GZQ6 430 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 H2AFY2Q9P0M6 372 aaPredicted RBP12.5□□□□□ -0.41
SEC13-213ENST00000445064 SLC22A13Q9Y226 551 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 POLDIP2Q9Y2S7 368 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 R4GMQ9 66 aa12.5□□□□□ -0.41
SEC13-213ENST00000445064 FAM90A8PA6NJQ4 464 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 INMTO95050 263 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 DLX6P56179 175 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 ACTR3P61158 418 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 ERVK11-1P61568 191 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 COL10A1Q03692 680 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
SEC13-213ENST00000445064 NRBF2Q96F24 287 aa12.49□□□□□ -0.41
SEC13-213ENST00000445064 FAM230AA0A1W2PPH8 454 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 TCRBV3S1A0A5B6 114 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 H3BSH0 61 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 K7N7A8 449 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 GYG2O15488 501 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 MITFO75030 526 aaPredicted RBP12.48□□□□□ -0.41
SEC13-213ENST00000445064 ARG1P05089 322 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 MPZP25189 248 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 EFNB1P98172 346 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 FAM189A2Q15884 450 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 ODF4Q2M2E3 257 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 NSUN5P1Q3KNT7 163 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 SAMD5Q5TGI4 173 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 AADACL4Q5VUY2 407 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
SEC13-213ENST00000445064 DNAJC9Q8WXX5 260 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 MOB1AQ9H8S9 216 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 ADGRL4Q9HBW9 690 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 SERTAD4Q9NUC0 356 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 MRM2Q9UI43 246 aaKnown RBP12.48□□□□□ -0.41
SEC13-213ENST00000445064 POMPQ9Y244 141 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
SEC13-213ENST00000445064 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 F8VVB4 439 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 F8VWA3 439 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
SEC13-213ENST00000445064 CHRM2P08172 466 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 CD28P10747 220 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 EPHA2P29317 976 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 EDDM3BP56851 147 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 IL24Q13007 206 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 SSX2Q16385 188 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 FBLN7Q53RD9 439 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 LDLRAD2Q5SZI1 272 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 Q6ZSR3 168 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 SSX6Q7RTT6 188 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 DTX3Q8N9I9 347 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 OR13D1Q8NGV5 346 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 UTP4Q969X6 686 aaKnown RBP12.47□□□□□ -0.41
SEC13-213ENST00000445064 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 IL4I1Q96RQ9 567 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 MNTQ99583 582 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 TBX5Q99593 518 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 PKIBQ9C010 78 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 CLN6Q9NWW5 311 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
SEC13-213ENST00000445064 A6NDX4 124 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 ZNF728P0DKX0 622 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 DYNC1I2Q13409 638 aaKnown RBP12.46□□□□□ -0.41
SEC13-213ENST00000445064 UBE2V2Q15819 145 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 OXLD1Q5BKU9 147 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 KPRPQ5T749 579 aaPredicted RBP12.46□□□□□ -0.41
SEC13-213ENST00000445064 SLX4IPQ5VYV7 408 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 YIPF7Q8N8F6 280 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 TMEM163Q8TC26 289 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 SLC7A6OSQ96CW6 309 aaPredicted RBP12.46□□□□□ -0.41
SEC13-213ENST00000445064 OR5M11Q96RB7 305 aa12.46□□□□□ -0.41
SEC13-213ENST00000445064 CADM1Q9BY67 442 aaKnown RBP12.46□□□□□ -0.41
SEC13-213ENST00000445064 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms