RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 EBPLQ9BY08 206 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 ADGRL4Q9HBW9 690 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 GLS2Q9UI32 602 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 C14orf166Q9Y224 244 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 DUOX2Q9NRD8 1548 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 A0A087WWV3 80 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SLC17A3O00476 420 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 FABP7O15540 132 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 CSF3P09919 207 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 CD96P40200 585 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 GALR1P47211 349 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 REG1BP48304 166 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 HNRNPA3P51991 378 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 PDX1P52945 283 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 HSPE1P61604 102 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 ZNF616Q08AN1 781 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 CD226Q15762 336 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 C1orf194Q5T5A4 169 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 PIGZQ86VD9 579 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 BPIFB2Q8N4F0 458 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 PHLDA1Q8WV24 401 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 LRRC58Q96CX6 371 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 LINC00477Q96M19 166 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 SPATA25Q9BR10 227 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 MARVELD1Q9BSK0 173 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 ZNF223Q9UK11 482 aaPredicted RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 BTRCQ9Y297 605 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 UTP11Q9Y3A2 253 aaKnown RBP3.27□□□□□ -1.89
UBR3-206ENST00000444475 MEGF6O75095 1541 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 AKAP11Q9UKA4 1901 aa3.27□□□□□ -1.89
UBR3-206ENST00000444475 MEIKINA0A087WXM9 373 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 IGHV2OR16-5A0A0B4J2B6 119 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 LOC101059948A0A1B0GTJ6 334 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TRIM49D1C9J1S8 452 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 GLUD1P00367 558 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 MPC1LP0DKB6 136 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 DDTP30046 118 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 CHRNB4P30926 498 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 RAB38P57729 211 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 PPP1CBP62140 327 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 ZNF589Q86UQ0 364 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 VRK3Q8IV63 474 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 OR52L1Q8NGH7 329 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 AGAP11Q8TF27 550 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SMARCD1Q96GM5 515 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 FAM19A4Q96LR4 140 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 FAM206AQ9NX38 181 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 GNPTGQ9UJJ9 305 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SSH2Q76I76 1423 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ADAMTS13Q76LX8 1427 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 PKD1L3Q7Z443 1732 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 BAZ2AQ9UIF9 1905 aaKnown RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 TRGV11A0A075B6L2 103 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 A0A087WUU8 490 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 NKX2-6A6NCS4 301 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TNFRSF11BO00300 401 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TTRP02766 147 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 LGALS2P05162 132 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ZNF708P17019 499 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TAS2R43P59537 309 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 DUSP6Q16828 381 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 CEACAM16Q2WEN9 425 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 PARP15Q460N3 678 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 PAMR1Q6UXH9 720 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 NEGR1Q7Z3B1 354 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 COMMD7Q86VX2 200 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 LYG1Q8N1E2 194 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SLC37A2Q8TED4 501 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SFT2D1Q8WV19 159 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ZNF486Q96H40 463 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 RTBDNQ9BSG5 229 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 DNAJC12Q9UKB3 198 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 KIAA1551Q9HCM1 1747 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 MEIOCA2RUB1 952 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 SUPT7LO94864 414 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 OR8U8P0C7N1 319 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TSPOP30536 169 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 SAA4P35542 130 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 TDGF1P3P51864 188 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 BIDP55957 195 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 BTG1P62324 171 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 LCE2DQ5TA82 110 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 OTUD1Q5VV17 481 aaPredicted RBP3.26□□□□□ -1.89
UBR3-206ENST00000444475 TRIM40Q6P9F5 258 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 XKRXQ6PP77 449 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 LINC01551Q86U37 167 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ZNF383Q8NA42 475 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 NEXN-AS1Q8NBZ9 246 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 OR5H6Q8NGV6 325 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ZNF502Q8TBZ5 544 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 RDH5Q92781 318 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 IL22RA2Q969J5 263 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ADGRG7Q96K78 797 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 Q9HAA7 133 aa3.26□□□□□ -1.89
UBR3-206ENST00000444475 ELL3Q9HB65 397 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms