RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 FAM81AQ8TBF8 368 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 THEM6Q8WUY1 208 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ARMC1Q9NVT9 282 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 VNN3Q9NY84 501 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 ZMAT5Q9UDW3 170 aaKnown RBP11.44□□□□□ -0.58
HMGN1-208ENST00000443046 KLHDC2Q9Y2U9 406 aa11.44□□□□□ -0.58
HMGN1-208ENST00000443046 PQLC2LA1A4F0 135 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
HMGN1-208ENST00000443046 TNFRSF11BO00300 401 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 OR2F2O95006 317 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 NXPH2O95156 264 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 HSD17B1P14061 328 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 HAAOP46952 286 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 MEF2CQ06413 473 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-208ENST00000443046 RIPPLY1Q0D2K3 151 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 IL18R1Q13478 541 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 LCN1P1Q5VSP4 162 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 PLCXD3Q63HM9 321 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 TMEM42Q69YG0 159 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 PIGWQ7Z7B1 504 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 OR51D1Q8NGF3 324 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 P2RX4Q99571 388 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 FAM206AQ9NX38 181 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 OR14J1Q9UGF5 321 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 MAGEL2Q9UJ55 1249 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 HHLA2Q9UM44 414 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 SLC22A13Q9Y226 551 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 POLDIP2Q9Y2S7 368 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 SESN1Q9Y6P5 492 aa11.43□□□□□ -0.58
HMGN1-208ENST00000443046 SELENOFO60613 162 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 CCDC22O60826 627 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 RAMP3O60896 148 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 SOX14O95416 240 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 NRASP01111 189 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 ALOX5APP20292 161 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 CD24P25063 80 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 HTR1DP28221 377 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 SLC6A1P30531 599 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 MYCNOSP40205 109 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 RPL23AP62750 156 aaKnown RBP11.42□□□□□ -0.58
HMGN1-208ENST00000443046 KLHL22Q53GT1 634 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 KHDC1LQ5JSQ8 128 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 UNQ9370/PRO34162Q6UXP9 181 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 ZBTB49Q6ZSB9 765 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 AQP11Q8NBQ7 271 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 NDNFQ8TB73 568 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 TEAD3Q99594 435 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 SLC25A33Q9BSK2 321 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 DGCR6LQ9BY27 220 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 TMEM133Q9H2Q1 129 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 GPR84Q9NQS5 396 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 DNAJB9Q9UBS3 223 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 ENPP5Q9UJA9 477 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 PIGLQ9Y2B2 252 aa11.42□□□□□ -0.58
HMGN1-208ENST00000443046 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-208ENST00000443046 CCNB2O95067 398 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 MAGEA2P43356 314 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 EDDM3BP56851 147 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF684Q5T5D7 378 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 CD300LDQ6UXZ3 194 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 GDPD3Q7L5L3 318 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF676Q8N7Q3 588 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 ASCC1Q8N9N2 400 aaKnown RBP11.41□□□□□ -0.58
HMGN1-208ENST00000443046 OR51E1Q8TCB6 317 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 NSMCE2Q96MF7 247 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 ZNF649Q9BS31 505 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 CLEC7AQ9BXN2 247 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 PCDHGB5Q9Y5G0 923 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 LINC00312Q9Y6C7 94 aa11.41□□□□□ -0.58
HMGN1-208ENST00000443046 TMEM269A0A1B0GVZ9 245 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 TMEM82A0PJX8 343 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 F8VVB4 439 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 F8VWA3 439 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 ARPC2O15144 300 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 GSC2O15499 205 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 MMP23AO75900 390 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 DHRS3O75911 302 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 DNAJC8O75937 253 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-208ENST00000443046 BRS3P32247 399 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 BDH1Q02338 343 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 IL24Q13007 206 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 C18orf65Q6ZTR6 163 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 TFAP2CQ92754 450 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 PKIBQ9C010 78 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 PBOV1Q9GZY1 135 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 OR51V1Q9H2C8 321 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 SEBOXQ9HB31 216 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-208ENST00000443046 TAS2R1Q9NYW7 299 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 DPM3Q9P2X0 92 aa11.4□□□□□ -0.58
HMGN1-208ENST00000443046 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
HMGN1-208ENST00000443046 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms