RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ANKRD61A6NGH8 418 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 NDUFS8O00217 210 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 GPR31O00270 319 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TMIGD3P0DMS9 266 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PPP3R1P63098 170 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 SEM1Q6ZVN7 128 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 NANOS1Q8WY41 292 aaKnown RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 BCL2L2Q92843 193 aaPredicted RBP7.03□□□□□ -1.28
CCDC39-201ENST00000442201 OR51B6Q9H340 312 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 GPR84Q9NQS5 396 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PLSCR4Q9NRQ2 329 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 GFOD1Q9NXC2 390 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF319Q9P2F9 582 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 COMMD3Q9UBI1 195 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 PROCRQ9UNN8 238 aa7.03□□□□□ -1.28
CCDC39-201ENST00000442201 TRAV8-7A0A075B6U6 113 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 ITGB1BP1O14713 200 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SIGLEC5O15389 551 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TXNL1O43396 289 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 EPXP11678 715 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 APEX1P27695 318 aaKnown RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TIMP3P35625 211 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 RAB1AP62820 205 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PLP2Q04941 152 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 KLRB1Q12918 225 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 GPR176Q14439 515 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 GFOD2Q3B7J2 385 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PYY3Q5JQD4 70 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SFRP5Q5T4F7 317 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 BAIAP2L2Q6UXY1 529 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SERPINA12Q8IW75 414 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PXT1Q8NFP0 134 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 RAB24Q969Q5 203 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SH3BGRL2Q9UJC5 107 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 V9GY05 133 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 BOD1L1Q8NFC6 3051 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 A0A0U1RQV5 110 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 A0A1B0GTI1 187 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 MCRIP1C9JLW8 97 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TNFSF13O75888 250 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 UBL3O95164 117 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 RD3LP0DJH9 198 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PPP3CBP16298 524 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 IGHV1-2P23083 117 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 MRPS11P82912 194 aaKnown RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 P2RY14Q15391 338 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SLC25A35Q3KQZ1 300 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 HIKESHIQ53FT3 197 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PRR30Q53SZ7 412 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SPNS3Q6ZMD2 512 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 DOK3Q7L591 496 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 FAM71F1Q96KD3 344 aaPredicted RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 OR10A2Q9H208 303 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 FOXJ3Q9UPW0 622 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TMEM218A2RU14 115 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 DISC1C4P0D8 188 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SLC19A2O60779 497 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TOXO94900 526 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 LCATP04180 440 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 MAS1P04201 325 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 ADRA2CP18825 462 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 FSTP19883 344 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 RBPJQ06330 500 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 LRRTM1Q86UE6 522 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF561Q8N587 486 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 BEND2Q8NDZ0 799 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 CPEB3Q8NE35 698 aaKnown RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 FGGYQ96C11 551 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 STARD4Q96DR4 205 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 TSNAXQ99598 290 aaKnown RBP7.02□□□□□ -1.29
CCDC39-201ENST00000442201 PRORYQ9H606 182 aa7.02□□□□□ -1.29
CCDC39-201ENST00000442201 SVILO95425 2214 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 IFITM5A6NNB3 132 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 H7C1Q1 480 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 TMEM127O75204 238 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 RP2O75695 350 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 RAD51DO75771 328 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 LYZL6O75951 148 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ZNF20P17024 532 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ATF1P18846 271 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 CCL1P22362 96 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
CCDC39-201ENST00000442201 GSG1Q2KHT4 349 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 KRTAP27-1Q3LI81 207 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 MOB3CQ70IA8 216 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 DOLPP1Q86YN1 238 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 RPRMLQ8N4K4 120 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 C15orf54Q8N8G6 183 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 TOLLIPQ9H0E2 274 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 PLEKHA1Q9HB21 404 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 TAS2R4Q9NYW5 299 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 ABRACLQ9P1F3 81 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 TLN1Q9Y490 2541 aaKnown RBP7.01□□□□□ -1.29
CCDC39-201ENST00000442201 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
CCDC39-201ENST00000442201 METTL21EPA6NDL7 271 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms