RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 Q5PR19 223 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LRRN1Q6UXK5 716 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 MDP1Q86V88 176 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 LINC00469Q8N7U9 141 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM229BQ8NBD8 167 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR11L1Q8NGX0 322 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 CCL17Q92583 94 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 BCL2L14Q9BZR8 327 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 ASH2LQ9UBL3 628 aa6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF230Q9UIE0 474 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-208ENST00000442054 SULT1C2O00338 296 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 PLPP3O14495 311 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 CREBL2O60519 120 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 TSC22D2O75157 780 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 CD3DP04234 171 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR4A8P0C604 315 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC25A4P12235 298 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 IGHV1-2P23083 117 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 KLF3P57682 345 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 B3GALT5-AS1P59052 145 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 HFEQ30201 348 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RTN4RL2Q86UN3 420 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 GJC3Q8NFK1 279 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR6M1Q8NGM8 313 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 TMEM106AQ96A25 262 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ELMOD3Q96FG2 381 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 TAAR3PQ9P1P4 343 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 FBLN5Q9UBX5 448 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RFPL4AA6NLU0 287 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RFPL4AL1F8VTS6 287 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 H7C1Q1 480 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 SSNA1O43805 119 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 SIX6O95475 246 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 BPNT1O95861 308 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF345Q14585 488 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCTD18Q6PI47 426 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 DPY19L4Q7Z388 723 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 LINC00346Q8IVM7 164 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR51D1Q8NGF3 324 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 KCNK17Q96T54 332 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 DNAJB11Q9UBS4 358 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 TRBV6-7A0A0A0MS04 114 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 IGKV1D-43A0A0B4J1Z2 117 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 LOC100289279A0A1B0GTE1 492 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 NPIPB13A6NJU9 1138 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ANKRD30BLA7E2S9 258 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 NPIPB4C9JG80 1138 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 I3L521 148 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RPP14O95059 124 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RLN2P04090 185 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 CSF1P09603 554 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 HLA-DOBP13765 273 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF32P17041 273 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZBTB25P24278 435 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 APOBEC3AP31941 199 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 GPR6P46095 362 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 POU3F4P49335 361 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 P2RY4P51582 365 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 UNC119Q13432 240 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ETFDHQ16134 617 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ARSJQ5FYB0 599 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 PABPC1L2AQ5JQF8 200 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 DPPA2Q7Z7J5 298 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF679Q8IYX0 411 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF433Q8N7K0 673 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 DEFB108BQ8NET1 73 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 NOXO1Q8NFA2 376 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR51S1Q8NGJ8 323 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR10S1Q8NGN2 331 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 LRRC20Q8TCA0 184 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 C15orf40Q8WUR7 153 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 MS4A7Q9GZW8 240 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 BCO1Q9HAY6 547 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 RASL12Q9NYN1 266 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 TNFSF18Q9UNG2 199 aa6.38□□□□□ -1.39
CDC42BPA-208ENST00000442054 PRSS37A4D1T9 235 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 LRRC30A6NM36 301 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 MS4A18H0YCH9 400 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 LMX1BO60663 402 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 TACSTD2P09758 323 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 LYL1P12980 280 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF35P13682 527 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 CTLA4P16410 223 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 CRYGSP22914 178 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 PDLIM4P50479 330 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 UBE2MP61081 183 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 MS4A18Q3C1V0 323 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ZNF260Q3ZCT1 412 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OTPQ5XKR4 325 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 OR6X1Q8NH79 312 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM168AQ92567 244 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 RAB1CQ92928 201 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 FAM3DQ96BQ1 224 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 SLC22A13Q9Y226 551 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 VSIG4Q9Y279 399 aa6.37□□□□□ -1.39
CDC42BPA-208ENST00000442054 ABCA1O95477 2261 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms