RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 B5MCH6 92 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 H3BMH7 237 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 SPRY2O43597 315 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 NCR1O76036 304 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 PRSS56P0CW18 603 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 MAOAP21397 527 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 CDK3Q00526 305 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF181Q2M3W8 571 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 MFSD4AQ8N468 514 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 BPIFB2Q8N4F0 458 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 PARP16Q8N5Y8 322 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 BADQ92934 168 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 ARL11Q969Q4 196 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 ADGRG7Q96K78 797 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 GPR82Q96P67 336 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 CDH20Q9HBT6 801 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 GALPQ9UBC7 116 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 DHDHQ9UQ10 334 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 NLRC5Q86WI3 1866 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 RBFOX2O43251 390 aaKnown RBP eCLIP9.12□□□□□ -0.95
SYNE2-206ENST00000441438 MPC2O95563 127 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 ALDOCP09972 364 aaKnown RBP9.12□□□□□ -0.95
SYNE2-206ENST00000441438 EDDM3AQ14507 147 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 P2RY6Q15077 328 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 UMODL1-AS1Q8N2C9 162 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 CHST4Q8NCG5 386 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 OR4C13Q8NGP0 309 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 RBFOX1Q9NWB1 397 aaKnown RBP9.12□□□□□ -0.95
SYNE2-206ENST00000441438 IL17CQ9P0M4 197 aa9.12□□□□□ -0.95
SYNE2-206ENST00000441438 NSG1A0A0A6YYJ2 146 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 TRAV39A0A0B4J263 110 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 LOC100130705A0A1B0GUX0 176 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 HYAL3O43820 417 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 HOXA5P20719 270 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 NTSP30990 170 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ETV6P41212 452 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 NSG1P42857 185 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 OR3A2P47893 321 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 GLRBP48167 497 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 DLX6P56179 175 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ERVFC1-1P60608 527 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 TLE3Q04726 772 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 PTAR1Q7Z6K3 402 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 LAPTM4BQ86VI4 370 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF664Q8N3J9 261 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 KIR3DL3Q8N743 410 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF614Q8N883 585 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 RDH12Q96NR8 316 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 SMIM28A0A1B0GU29 152 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 PMP2P02689 132 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 NHLRC3Q5JS37 347 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 CLEC12AQ5QGZ9 265 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 C9orf57Q5W0N0 161 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 NCBP2-AS2Q69YL0 99 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 FA2HQ7L5A8 372 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 DEFB123Q8N688 67 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 SCMH1Q96GD3 660 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ADTRPQ96IZ2 230 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 A4GALTQ9NPC4 353 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 OAZ3Q9UMX2 235 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 FIS1Q9Y3D6 152 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 AK6Q9Y3D8 172 aaKnown RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 A0A1W2PPI3 338 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF207O43670 478 aaKnown RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 IGF1P05019 195 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 CD33P20138 364 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 HECTD2Q5U5R9 776 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 ACVR1CQ8NER5 493 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 OR52L1Q8NGH7 329 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 SP7Q8TDD2 431 aaPredicted RBP9.11□□□□□ -0.95
SYNE2-206ENST00000441438 IRF7Q92985 503 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 OR51J1Q9H342 316 aa9.11□□□□□ -0.95
SYNE2-206ENST00000441438 FNDC1Q4ZHG4 1894 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-206ENST00000441438 MYADML2A6NDP7 307 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 TMEM8BA6NDV4 472 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 HPRT1P00492 218 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
SYNE2-206ENST00000441438 CRHBPP24387 322 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
SYNE2-206ENST00000441438 CTF1Q16619 201 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 ZNF66Q6ZN08 573 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 SLC35E3Q7Z769 313 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 OR1B1Q8NGR6 318 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 OR2G2Q8NGZ5 317 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 TMEM30AQ9NV96 361 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 FBXO4Q9UKT5 387 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 GABARAPO95166 117 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 UCHL1P09936 223 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 HLA-EP13747 358 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 TIAL1Q01085 375 aaKnown RBP eCLIP9.1□□□□□ -0.95
SYNE2-206ENST00000441438 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
SYNE2-206ENST00000441438 FRRS1Q6ZNA5 592 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms