RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 DRAM2Q6UX65 266 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TMEM108Q6UXF1 575 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 RFPL4BQ6ZWI9 263 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 DPPA2Q7Z7J5 298 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NR2C2APQ86WQ0 139 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF101Q8IZC7 436 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CMTM4Q8IZR5 234 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 C17orf78Q8N4C9 275 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 OR5AK2Q8NH90 309 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NANPQ8TBE9 248 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 HAVCR2Q8TDQ0 301 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 RAB2BQ8WUD1 216 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 SLC25A28Q96A46 364 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 MUCL1Q96DR8 90 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF799Q96GE5 643 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 DERL3Q96Q80 235 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 GFI1Q99684 422 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 LYSTQ99698 3801 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CITED1Q99966 193 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 KCNS3Q9BQ31 491 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 C1QTNF5Q9BXJ0 243 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 KCNN2Q9H2S1 579 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NIPAL2Q9H841 368 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 EXOSC4Q9NPD3 245 aaKnown RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NOX4Q9NPH5 578 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 NDUFA13Q9P0J0 144 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 CRNNQ9UBG3 495 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ATPIF1Q9UII2 106 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 GTF2A1LQ9UNN4 478 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 N6AMT1Q9Y5N5 214 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 ARHGAP32A7KAX9 2087 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 HYDINQ4G0P3 5121 aa4.02□□□□□ -1.77
PTPN4-206ENST00000441089 TRAV8-7A0A075B6U6 113 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 hCG_38984A0A1B0GV85 526 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 IQCMA0A1B0GVH7 501 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 A0A1W2PPK0 400 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SMIM30A4D0T7 59 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 CCDC160A6NGH7 325 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ANKRD61A6NGH8 418 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF879B4DU55 563 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 C3orf84H3BNL1 204 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF701M0R085 212 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 HLA-DPB1P04440 258 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ISG15P05161 165 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ANXA2P07355 339 aaKnown RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 MSMBP08118 114 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 UCHL1P09936 223 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF35P13682 527 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF182P17025 639 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 IGFBP3P17936 291 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 MDKP21741 143 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ACHEP22303 614 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 GALP22466 123 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 CCNOP22674 350 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 PTAFRP25105 342 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ACKR3P25106 362 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 PSMA1P25786 263 aaKnown RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 IL2RGP31785 369 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 APOBEC3AP31941 199 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SDC2P34741 201 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SLC6A9P48067 706 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SERPINB10P48595 397 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF83P51522 516 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 TPTEP56180 551 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 OR10A3P58181 314 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ERVS71-1P61550 626 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF92Q03936 586 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SPOCK1Q08629 439 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 PPA1Q15181 289 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 TAF9Q16594 264 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 Q499Y3 187 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 YIF1BQ5BJH7 314 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 TIMM23BQ5SRD1 257 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 BCL2L15Q5TBC7 163 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 C11orf87Q6NUJ2 197 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 FAHD2BQ6P2I3 314 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 GDPGP1Q6ZNW5 385 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 Q6ZSR3 168 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 RNF144BQ7Z419 303 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 CEACAM19Q7Z692 300 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 LRRTM1Q86UE6 522 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 CCDC36Q8IYA8 594 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 MS4A15Q8N5U1 240 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF676Q8N7Q3 588 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SLC30A7Q8NEW0 376 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 OR1J2Q8NGS2 313 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 OR51F2Q8NH61 342 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 OR2AE1Q8NHA4 323 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 OR51E1Q8TCB6 317 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 DYNC2LI1Q8TCX1 351 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SPTSSAQ969W0 71 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 SGK3Q96BR1 496 aa4.01□□□□□ -1.77
PTPN4-206ENST00000441089 ADAT3Q96EY9 351 aaPredicted RBP4.01□□□□□ -1.77
PTPN4-206ENST00000441089 FAHD2AQ96GK7 314 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms