RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CD34P28906 385 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 HRH1P35367 487 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 PMELP40967 661 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 FUT6P51993 359 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 PER3P56645 1201 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 PLP2Q04941 152 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SRSF4Q08170 494 aaKnown RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 MALLQ13021 153 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 DHRS2Q13268 280 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SLC10A1Q14973 349 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 RSU1Q15404 277 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 UBE2V2Q15819 145 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 RSPO1Q2MKA7 263 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SCGB2B2Q4G0G5 96 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 PABPC1L2AQ5JQF8 200 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 ASCL4Q6XD76 172 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 COLCA1Q6ZS62 124 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 TMED4Q7Z7H5 227 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 LYG2Q86SG7 212 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SLC25A42Q86VD7 318 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 HOGA1Q86XE5 327 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SKA3Q8IX90 412 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 MUC20Q8N307 709 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 OR13C8Q8NGS7 320 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 AKR7LQ8NHP1 331 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 FNDC9Q8TBE3 224 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 DVL3Q92997 716 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 APOBEC3DQ96AK3 386 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SGK3Q96BR1 496 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 ZNF837Q96EG3 531 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SPACA5Q96QH8 159 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 PHB2Q99623 299 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SLC6A7Q99884 636 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 NICN1Q9BSH3 213 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SOX7Q9BT81 388 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 HES7Q9BYE0 225 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 GSX1Q9H4S2 264 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 SLC7A10Q9NS82 523 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 ELF5Q9UKW6 265 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-209ENST00000440653 KCNMB2Q9Y691 235 aa7.92□□□□□ -1.14
HDAC6-209ENST00000440653 A0A0B4J2A0 478 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 SLC22A20A6NK97 555 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 KIAA1324LA8MWY0 1029 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 E9PLN8 166 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 MKRN2OSH3BPM6 223 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 L7N2F9 121 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 F10P00742 488 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 NRASP01111 189 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 CD8AP01732 235 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 CELA3AP09093 270 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ZNF35P13682 527 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 RPA2P15927 270 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 HLA-GP17693 338 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ACKR3P25106 362 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 MPGP29372 298 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 TNFSF10P50591 281 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 MTCP1P56278 107 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ARF1P84077 181 aaKnown RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 FAM3AP98173 230 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 HGFACQ04756 655 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 Q5BKY6 102 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 PLAC9Q5JTB6 97 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 IGFL2Q6UWQ7 119 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 CCDC36Q8IYA8 594 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 SAXO1Q8IYX7 474 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 MITD1Q8WV92 249 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 FBXW5Q969U6 566 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 CMBLQ96DG6 245 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ELMOD3Q96FG2 381 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 GMPPAQ96IJ6 420 aaPredicted RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ARHGAP5-AS1Q96IT6 56 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 PECRQ9BY49 303 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 BANF2Q9H503 90 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 LDAHQ9H6V9 325 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ZMAT3Q9HA38 289 aaKnown RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 GPR173Q9NS66 373 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 CA10Q9NS85 328 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 PIPOXQ9P0Z9 390 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 MYEF2Q9P2K5 600 aaKnown RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 SHPKQ9UHJ6 478 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 KCNK7Q9Y2U2 307 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 NOP16Q9Y3C1 178 aaKnown RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 PKDREJQ9NTG1 2253 aa7.91□□□□□ -1.14
HDAC6-209ENST00000440653 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
HDAC6-209ENST00000440653 ACANP16112 2415 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 TRAV17A0A0B4J275 112 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 PLSCR5A0PG75 271 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 RFPL4AA6NLU0 287 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 RFPL4AL1F8VTS6 287 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SOCS1O15524 211 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SS18L1O75177 396 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 RP2O75695 350 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 SLC22A5O76082 557 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 DUS4LO95620 317 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CNOT4O95628 575 aaKnown RBP7.9□□□□□ -1.14
HDAC6-209ENST00000440653 IGHG3P01860 377 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 TMEM225BP0DP42 221 aa7.9□□□□□ -1.14
HDAC6-209ENST00000440653 CD99P14209 185 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms