RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 OR11L1Q8NGX0 322 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ADAMTS17Q8TE56 1095 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 IMMP1LQ96LU5 166 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 CNTNAP3Q9BZ76 1288 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 C1orf123Q9NWV4 160 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 WNT16Q9UBV4 365 aa11.8□□□□□ -0.52
HERPUD1-204ENST00000439977 EIF1BO60739 113 aaKnown RBP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 FHITP49789 147 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 SLC16A14Q7RTX9 510 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 LYZL2Q7Z4W2 148 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 ESX1Q8N693 406 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 OR14L1PQ8NHC6 308 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 MAFAQ8NHW3 353 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 ANGPTL4Q9BY76 406 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 GHRLQ9UBU3 117 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 NSG1A0A0A6YYJ2 146 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 CXCL13O43927 109 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 OTX1P32242 354 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 HTR5AP47898 357 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 FBXL14Q8N1E6 418 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 TM2D1Q9BX74 207 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 METTL9Q9H1A3 318 aa11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 FOXD3Q9UJU5 478 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-204ENST00000439977 OR8U9P0C7N5 309 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 PET100P0DJ07 73 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 CCNOP22674 350 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 RFC3P40938 356 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 HFEQ30201 348 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 OR8U1Q8NH10 309 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 PIGCQ92535 297 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 BORCS8Q96FH0 119 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 NRIP2Q9BQI9 281 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 LOC400499M0QZD8 3231 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 C1QL1O75973 258 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 RGS19P49795 217 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 ZNF239Q16600 458 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 FAM27BQ5VT28 67 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 SLC23A3Q6PIS1 610 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 SLC22A25Q6T423 547 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 Q6ZRG5 221 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 P4HTMQ9NXG6 502 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 MEMO1Q9Y316 297 aa11.78□□□□□ -0.52
HERPUD1-204ENST00000439977 RNASEK-C17orf49H0YIS7 233 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 SLC33A1O00400 549 aaPredicted RBP11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 IFNA21P01568 189 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 LYL1P12980 280 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 NR2C1P13056 603 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 OTX2P32243 289 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 CARD18P57730 90 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 OR5T2Q8NGG2 359 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 RHBDD1Q8TEB9 315 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 RTN4IP1Q8WWV3 396 aaPredicted RBP11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 PRRX2Q99811 253 aa11.77□□□□□ -0.52
HERPUD1-204ENST00000439977 VAMP5O95183 116 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 CCL2P13500 99 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 RAC1P63000 192 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF92Q03936 586 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 RCC2Q9P258 522 aaKnown RBP11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 ST3GAL6Q9Y274 331 aa11.77□□□□□ -0.53
HERPUD1-204ENST00000439977 CRYM-AS1A6NIL9 109 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 C9J4A7 227 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 HSPB6O14558 160 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 SYNGR3O43761 229 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 NME2P1O60361 137 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 NRASP01111 189 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 PDGFBP01127 241 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 FCGR3AP08637 254 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF728P0DKX0 622 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 RBP2P50120 134 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CAV2P51636 162 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 PSG4Q00888 419 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 PDZK1IP1Q13113 114 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 STK11Q15831 433 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 CEACAM16Q2WEN9 425 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 MEX3BQ6ZN04 569 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 ZNF845Q96IR2 970 aaPredicted RBP11.76□□□□□ -0.53
HERPUD1-204ENST00000439977 SMOC1Q9H4F8 434 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms