RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 A0A087X0M5 115 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 IGHV3-15A0A0B4J1V0 119 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 A0A1B0GX30 115 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 BLACEA4D250 179 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 RBFOX3A6NFN3 312 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 PRR19A6NJB7 356 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 G3V3Y1 287 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 CYTIPO60759 359 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 HLA-HP01893 362 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 CAPZBP47756 277 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 RPS23P62266 143 aaKnown RBP7.96□□□□□ -1.13
COPB1-202ENST00000439561 RUNX1Q01196 453 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 C17orf67Q0P5P2 114 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 GFI1BQ5VTD9 330 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 AADACL3Q5VUY0 350 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 C7orf61Q8IZ16 206 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 OR52M1Q8NGK5 317 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 OR2AE1Q8NHA4 323 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 GPBAR1Q8TDU6 330 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 EDARADDQ8WWZ3 215 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 BORCS8Q96FH0 119 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 ABHD14AQ9BUJ0 271 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 FBRSQ9HAH7 460 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 NECAP2Q9NVZ3 263 aa7.96□□□□□ -1.13
COPB1-202ENST00000439561 CHD7Q9P2D1 2997 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 LINC01565O15544 149 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 DBHP09172 617 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 LINC00271P0C7V0 271 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 NKX2-1P43699 371 aaPredicted RBP7.96□□□□□ -1.14
COPB1-202ENST00000439561 GAMTQ14353 236 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 SURF2Q15527 256 aaPredicted RBP7.96□□□□□ -1.14
COPB1-202ENST00000439561 PYY3Q5JQD4 70 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 CMTM1Q8IZ96 169 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 TMEM156Q8N614 296 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 CYB561D1Q8N8Q1 229 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 LFNGQ8NES3 379 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 HPSE2Q8WWQ2 592 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 CPNE4Q96A23 557 aaPredicted RBP7.96□□□□□ -1.14
COPB1-202ENST00000439561 NKX2-4Q9H2Z4 354 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
COPB1-202ENST00000439561 DMRT1Q9Y5R6 373 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 BRWD1Q9NSI6 2320 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 USP34Q70CQ2 3546 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 VCANP13611 3396 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 TRBV11-1A0A0K0K1C0 115 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 OR5H15A6NDH6 313 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 BTBD17A6NE02 478 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 SERPINE3A8MV23 424 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 H3BMH7 237 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 IFNA10P01566 189 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 FOLR2P14207 255 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 ZNF266Q14584 549 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 ARL6IP1Q15041 203 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 TMEM240Q5SV17 173 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 OR5AS1Q8N127 324 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 ZNF721Q8TF20 911 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 LRRC61Q9BV99 259 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 METTL9Q9H1A3 318 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 ZNF319Q9P2F9 582 aa7.96□□□□□ -1.14
COPB1-202ENST00000439561 MCTS1Q9ULC4 181 aaKnown RBP7.96□□□□□ -1.14
COPB1-202ENST00000439561 LOC390937A0A1W2PQ73 354 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 ZNF729A6NN14 1252 aaPredicted RBP7.95□□□□□ -1.14
COPB1-202ENST00000439561 NPIPA2E9PIF3 369 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 NPIPA3F8WFD2 350 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 OR2J2O76002 312 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 DDAH2O95865 285 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 F10P00742 488 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 SEC11BP0C7V7 166 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 DANCRP0C864 163 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 P2RY1P47900 373 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 CSNK1A1P48729 337 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 THEM4Q5T1C6 240 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 COMMD1Q8N668 190 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 OR5C1Q8NGR4 320 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 OPA3Q9H6K4 179 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 NAA60Q9H7X0 242 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 RNF122Q9H9V4 155 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 ANXA10Q9UJ72 324 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 OSGIN2Q9Y236 505 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 MMACHCQ9Y4U1 282 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 SPTY2D1-AS1A0A0U1RR47 76 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 MSTNO14793 375 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 GEMIN2O14893 280 aaKnown RBP7.95□□□□□ -1.14
COPB1-202ENST00000439561 IFNA5P01569 189 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 GAPDHP04406 335 aaKnown RBP7.95□□□□□ -1.14
COPB1-202ENST00000439561 SPINK2P20155 84 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 ATP6V0CP27449 155 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 G0S2P27469 103 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 GABRA4P48169 554 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 OR1D5P58170 312 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 CCL20P78556 96 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 FZD2Q14332 565 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 SPNS3Q6ZMD2 512 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 GKN2Q86XP6 184 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 CCDC71LQ8N9Z2 235 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 SCGB1C1Q8TD33 95 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 ADIPOR1Q96A54 375 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 MESP1Q9BRJ9 268 aa7.95□□□□□ -1.14
COPB1-202ENST00000439561 HSF4Q9ULV5 492 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms