RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GPR160Q9UJ42 338 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 FBXO7Q9Y3I1 522 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 TRAV20A0A0B4J274 112 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF732B4DXR9 585 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF354AO60765 605 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 PGA4P0DJD7 388 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 PGA3P0DJD8 388 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR3A4PP47883 348 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 FUT6P51993 359 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 NDUFA6P56556 154 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 RPS27AP62979 156 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 UBA52P62987 128 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 S100A12P80511 92 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 ROM1Q03395 351 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 FNDC7Q5VTL7 733 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR2A2Q6IF42 318 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 KCNRGQ8N5I3 272 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 PPP1R1CQ8WVI7 109 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 SPIN2AQ99865 258 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 SPIN2BQ9BPZ2 258 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 GPR35Q9HC97 309 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 B3GAT1Q9P2W7 334 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 FAM96BQ9Y3D0 163 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 NME2P1O60361 137 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 CTRB1P17538 263 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 SNTB1Q13884 538 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 CTRB2Q6GPI1 263 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF573Q86YE8 665 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 ADPRHL1Q8NDY3 354 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 OCSTAMPQ9BR26 566 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 SPACA1Q9HBV2 294 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 DYNLRB1Q9NP97 96 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 NGBQ9NPG2 151 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 CSAG2Q9Y5P2 127 aa10.18□□□□□ -0.78
TRAPPC9-202ENST00000438773 RAMP1O60894 148 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 TTRP02766 147 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 CSRP1P21291 193 aaKnown RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 DUSP1P28562 367 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 TLE1Q04724 770 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 KLF9Q13886 244 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 LTC4SQ16873 150 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR1J1Q8NGS3 322 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF75AQ96N20 296 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 PRR13Q9NZ81 148 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 CYB5R1Q9UHQ9 305 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 FLVCR1Q9Y5Y0 555 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 KCNMB2Q9Y691 235 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 OBSL1O75147 1896 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 DEGS1O15121 323 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 KLF7O75840 302 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 PDCD1Q15116 288 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 IAH1Q2TAA2 248 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 AVPI1Q5T686 147 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 STPG2Q8N412 459 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 ADAT3Q96EY9 351 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 TMEM38BQ9NVV0 291 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 NECAP2Q9NVZ3 263 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 A0A0D9SG52 128 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 TMEM200AQ86VY9 491 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 OSR2Q8N2R0 312 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF441Q8N8Z8 693 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 MARCH1Q8TCQ1 289 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 FRZBQ92765 325 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 ARHGAP5-AS1Q96IT6 56 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 KLHDC3Q9BQ90 382 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.17□□□□□ -0.781e-8■■■■■ 54.8
TRAPPC9-202ENST00000438773 SEMA5BQ9P283 1151 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 POLDIP2Q9Y2S7 368 aa10.17□□□□□ -0.78
TRAPPC9-202ENST00000438773 C19orf67A6NJJ6 358 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 H7C1Q1 480 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 K7EPK0 472 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 CD1AP06126 327 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 MST1P26927 711 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SERPINF1P36955 418 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 GPM6AP51674 278 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 PMP22Q01453 160 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 C4orf17Q53FE4 359 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 OR2T2Q6IF00 324 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 FAM71E2Q8N5Q1 922 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZFP57Q9NU63 452 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF629Q9UEG4 869 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 PIGBOS1A0A0B4J2F0 54 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 A0A1B0GUH1 482 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 A0A1W2PNV4 684 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 GPR31O00270 319 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 PIN1P1O15428 100 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 CST2P09228 141 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 RFPL3SP0C7P2 107 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 S100PP25815 95 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 EIF2S3LQ2VIR3 472 aaKnown RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 MUC20Q8N307 709 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 SCGB1C1Q8TD33 95 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 ZNF2Q9BSG1 426 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 HEATR5AQ86XA9 2040 aa10.16□□□□□ -0.78
TRAPPC9-202ENST00000438773 LOC102723996A0A087X1L8 192 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms