RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 MEOX2P50222 304 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 CCL11P51671 97 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 SRYQ05066 204 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ARFRP1Q13795 201 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ABLIM2Q6H8Q1 611 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 CRIP3Q6Q6R5 217 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 OR51T1Q8NGJ9 327 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 RXFP4Q8TDU9 374 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 SSC4DQ8WTU2 575 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF629Q9UEG4 869 aaPredicted RBP12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 FLVCR1Q9Y5Y0 555 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 MEX3AA1L020 520 aaKnown RBP12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 C9orf170A2RU37 121 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 FCGR2AP12318 317 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 PTGFRP43088 359 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 GSK3AP49840 483 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 LHX2P50458 406 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF84P51523 738 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ECH1Q13011 328 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ZNF345Q14585 488 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 MAFIPQ8WZ33 124 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
PTCHD3-201ENST00000438700 A0A0B4J2A0 478 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 IGLV3-1P01715 115 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 SLC25A4P12235 298 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 B4GALT1P15291 398 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 CBR1P16152 277 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 FOXL2NBQ6ZUU3 175 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 TMEM200AQ86VY9 491 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 C20orf196Q8IYI0 205 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 HAS2Q92819 552 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 URM1Q9BTM9 101 aaKnown RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ST6GALNAC5Q9BVH7 336 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 OR10A2Q9H208 303 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 TREM1Q9NP99 234 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 SHPKQ9UHJ6 478 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 CSAG2Q9Y5P2 127 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 A0A0U1RQV5 110 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 GSTP1P09211 210 aaKnown RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 PI3P19957 117 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 NPY4RP50391 375 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF133P52736 654 aaPredicted RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 CLDN18P56856 261 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 CLN3Q13286 438 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF766Q5HY98 468 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ZDHHC22Q8N966 263 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 FDCSPQ8NFU4 85 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 NANPQ8TBE9 248 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 GLYATL2Q8WU03 294 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 ABHD3Q8WU67 409 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 RRNAD1Q96FB5 475 aaKnown RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 NUDT16L1Q9BRJ7 211 aaKnown RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 URB1O60287 2271 aaKnown RBP12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 FRYQ5TBA9 3013 aa12.08□□□□□ -0.48
PTCHD3-201ENST00000438700 PRSS44E7EML9 344 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 MFNGO00587 321 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 AKIRIN2Q53H80 203 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 DHRS7BQ6IAN0 325 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF774Q6NX45 483 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 RBMS3Q6XE24 437 aaKnown RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 SLC16A13Q7RTY0 426 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 ZFP62Q8NB50 900 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 PHB2Q99623 299 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 CHST5Q9GZS9 411 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 V9GYS6 101 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 EFSO43281 561 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 SGCEO43556 437 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 HTR3BO95264 441 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 FARS2O95363 451 aaKnown RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 ACAA1P09110 424 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 PRF1P14222 555 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 MPZP25189 248 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 BLVRBP30043 206 aaPredicted RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 THBS4P35443 961 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 HGFACQ04756 655 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 PDZK1IP1Q13113 114 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 RBM39Q14498 530 aaKnown RBP12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 RTP5Q14D33 572 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 FAM27BQ5VT28 67 aa12.07□□□□□ -0.48
PTCHD3-201ENST00000438700 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms