RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 MRI1Q9BV20 369 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 METTL9Q9H1A3 318 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 PLGRKTQ9HBL7 147 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 HES4Q9HCC6 221 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 TREM2Q9NZC2 230 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 MTCH1Q9NZJ7 389 aa15.47■□□□□ 0.07
HDAC6-208ENST00000438518 ABCA12Q86UK0 2595 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 OOEPA6NGQ2 149 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 IFITM5A6NNB3 132 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 LYNX1G3V0Z9 82 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 AIPO00170 330 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 PPIHO43447 177 aaKnown RBP15.46■□□□□ 0.07
HDAC6-208ENST00000438518 AKR7A2O43488 359 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 NDUFA2O43678 99 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 CDRT1O95170 752 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 LYNX1P0DP58 116 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 MDH2P40926 338 aaKnown RBP15.46■□□□□ 0.07
HDAC6-208ENST00000438518 OR3A4PP47883 348 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 SCAND1P57086 179 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 VBP1P61758 197 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 NCS1P62166 190 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 LSM3P62310 102 aaKnown RBP15.46■□□□□ 0.07
HDAC6-208ENST00000438518 CARTPTQ16568 116 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 MICBQ29980 383 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 TMEM155Q4W5P6 130 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 ELP2Q6IA86 826 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 FAM166AQ6J272 317 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 Q8NFD4 153 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 OR4D6Q8NGJ1 314 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 SLAMF9Q96A28 289 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 MRPS24Q96EL2 167 aaKnown RBP15.46■□□□□ 0.07
HDAC6-208ENST00000438518 GFI1Q99684 422 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 NAA50Q9GZZ1 169 aaKnown RBP15.46■□□□□ 0.07
HDAC6-208ENST00000438518 CST11Q9H112 138 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 RNF167Q9H6Y7 350 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 STEAP1Q9UHE8 339 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 CEPT1Q9Y6K0 416 aa15.46■□□□□ 0.07
HDAC6-208ENST00000438518 USF3Q68DE3 2245 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 AKAP6Q13023 2319 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 LGALS8O00214 317 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 NXPH2O95156 264 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 BPNT1O95861 308 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 IGHV2-70P01814 119 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 CSTBP04080 98 aaKnown RBP15.45■□□□□ 0.06
HDAC6-208ENST00000438518 SERPINB10P48595 397 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 ART1P52961 327 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 RSU1Q15404 277 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 RAB11BQ15907 218 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 DGUOKQ16854 277 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 SFXN4Q6P4A7 337 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 GLIPR1L1Q6UWM5 242 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 TGIF2LYQ8IUE0 185 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 SPICQ8N5J4 248 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 ISOC1Q96CN7 298 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 POM121Q96HA1 1249 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 RBM38Q9H0Z9 239 aaKnown RBP15.45■□□□□ 0.06
HDAC6-208ENST00000438518 DNTTIP1Q9H147 329 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 SEBOXQ9HB31 216 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-208ENST00000438518 WIPI2Q9Y4P8 454 aa15.45■□□□□ 0.06
HDAC6-208ENST00000438518 IGKV1-12A0A0C4DH73 117 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 VWC2LB2RUY7 222 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ANGPTL7O43827 346 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 KNG1P01042 644 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 IGKV1D-12P01611 117 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 EGR1P18146 543 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 FGF12P61328 243 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ZNF404Q494X3 552 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 NHLRC3Q5JS37 347 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 SPIN3Q5JUX0 258 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ACP7Q6ZNF0 438 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 RNF144BQ7Z419 303 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 LRRC28Q86X40 367 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-208ENST00000438518 FAM58AQ8N1B3 248 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 EMG1Q92979 244 aaKnown RBP15.44■□□□□ 0.06
HDAC6-208ENST00000438518 SLC25A46Q96AG3 418 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 BPESC1Q9GZL8 116 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ELL3Q9HB65 397 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-208ENST00000438518 NLKQ9UBE8 527 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 DNAJB11Q9UBS4 358 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 RSL24D1Q9UHA3 163 aaKnown RBP15.44■□□□□ 0.06
HDAC6-208ENST00000438518 GLS2Q9UI32 602 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 ING4Q9UNL4 249 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 PDZD2O15018 2839 aa15.44■□□□□ 0.06
HDAC6-208ENST00000438518 SPG11Q96JI7 2443 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 A0A0G2JK05 382 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 CCDC160A6NGH7 325 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 GTF2F2P13984 249 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 ARSBP15848 533 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 BCL3P20749 454 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 NR4A2P43354 598 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 OR10A3P58181 314 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 MXD1Q05195 221 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 FAM189A2Q15884 450 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 DCDC5Q6ZRR9 648 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 OR2W3Q7Z3T1 314 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 LINC00596Q86U02 117 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 OR51T1Q8NGJ9 327 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 KCNG3Q8TAE7 436 aa15.43■□□□□ 0.06
HDAC6-208ENST00000438518 SLC25A28Q96A46 364 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms