RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 OPN1MW3P0DN78 364 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 PIPP12273 146 aaPredicted RBP6.32□□□□□ -1.4
VPS50-204ENST00000438395 ANXA8P13928 327 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 ALOX5APP20292 161 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 PRDX2P32119 198 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 DCTDP32321 178 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 HAAOP46952 286 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 FLOT2Q14254 428 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 PLA1AQ53H76 456 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 FAM76BQ5HYJ3 339 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 CLVS2Q5SYC1 327 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 ACP7Q6ZNF0 438 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 REC114Q7Z4M0 266 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 PIGWQ7Z7B1 504 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 SPATA24Q86W54 205 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 MKXQ8IYA7 352 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 ASCC1Q8N9N2 400 aaKnown RBP6.32□□□□□ -1.4
VPS50-204ENST00000438395 POC1AQ8NBT0 407 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 CCDC197Q8NCU1 140 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 BBS1Q8NFJ9 593 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 OR5K1Q8NHB7 308 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 RPS4Y2Q8TD47 263 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 CAPSLQ8WWF8 208 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 DNAJC9Q8WXX5 260 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 RORBQ92753 470 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 LYZL4Q96KX0 146 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 TTTY10Q9BZA0 68 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 TVP23BQ9NYZ1 205 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
VPS50-204ENST00000438395 OR14J1Q9UGF5 321 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 NUFIP1Q9UHK0 495 aaKnown RBP6.32□□□□□ -1.4
VPS50-204ENST00000438395 PITPNC1Q9UKF7 332 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 SIGLEC9Q9Y336 463 aa6.32□□□□□ -1.4
VPS50-204ENST00000438395 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 AQP12BA6NM10 295 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 F2RL2O00254 374 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 PIN1P1O15428 100 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
VPS50-204ENST00000438395 KIR2DS4P43632 304 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 BMXP51813 675 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 EFNB2P52799 333 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 GYS2P54840 703 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 EDDM3BP56851 147 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR12D2P58182 307 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 MS4A2Q01362 244 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ROM1Q03395 351 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 DYNC1I2Q13409 638 aaKnown RBP6.31□□□□□ -1.4
VPS50-204ENST00000438395 FAM189A2Q15884 450 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 NSUN5P1Q3KNT7 163 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 DMRTC1Q5HYR2 192 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ZNF782Q6ZMW2 699 aaPredicted RBP6.31□□□□□ -1.4
VPS50-204ENST00000438395 ASRGL1Q7L266 308 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 GDPD3Q7L5L3 318 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 TRPM8Q7Z2W7 1104 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 AQP12AQ8IXF9 295 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ZNF679Q8IYX0 411 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ADGRG5Q8IZF4 528 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR4F17Q8NGA8 305 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR4M1Q8NGD0 313 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR2T27Q8NH04 317 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 PPP1R14AQ96A00 147 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ZNF488Q96MN9 340 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 OR4F4Q96R69 305 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 MNTQ99583 582 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 TEAD3Q99594 435 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 THTPAQ9BU02 230 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 FGF23Q9GZV9 251 aaPredicted RBP6.31□□□□□ -1.4
VPS50-204ENST00000438395 SLC25A19Q9HC21 320 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 PAPOLBQ9NRJ5 636 aaKnown RBP6.31□□□□□ -1.4
VPS50-204ENST00000438395 FAM206AQ9NX38 181 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 DNAJB9Q9UBS3 223 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ZNF222Q9UK12 451 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 FOXJ3Q9UPW0 622 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 SLC7A11Q9UPY5 501 aa6.31□□□□□ -1.4
VPS50-204ENST00000438395 ZNF670-ZNF695F2Z2N8 137 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 G3V4G9 280 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 DLGAP1O14490 977 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 GATBO75879 557 aaKnown RBP6.3□□□□□ -1.4
VPS50-204ENST00000438395 CYB5AP00167 134 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 ARG1P05089 322 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 KRT8P05787 483 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 OCM2P0CE71 109 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 OCMP0CE72 109 aaPredicted RBP6.3□□□□□ -1.4
VPS50-204ENST00000438395 PGA5P0DJD9 388 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 ZNF728P0DKX0 622 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CCL3L1P16619 93 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 PRKACGP22612 351 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 SLC2A5P22732 501 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
VPS50-204ENST00000438395 ARHGDIBP52566 201 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 HCCSP53701 268 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 CDK5Q00535 292 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 EMX1Q04741 257 aaPredicted RBP6.3□□□□□ -1.4
VPS50-204ENST00000438395 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
VPS50-204ENST00000438395 DNAL1Q4LDG9 190 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 TMEM236Q5W0B7 351 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 TMEM200BQ69YZ2 307 aa6.3□□□□□ -1.4
VPS50-204ENST00000438395 ZNF322Q6U7Q0 402 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms