RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 WBP1LQ9NX94 342 aa5.91□□□□□ -1.46
CSDE1-205ENST00000438362 A0A0U1RQK1 487 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 YKT6O15498 198 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 PDCD6O75340 191 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 CD8AP01732 235 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 CRYBA1P05813 215 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 IL11P20809 199 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 EIF2S3P41091 472 aaKnown RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 FZD5Q13467 585 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 IL13RA2Q14627 380 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 PDCD1Q15116 288 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 OR8G2PQ6IF36 304 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 KCNIP4Q6PIL6 250 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 FAM219AQ8IW50 185 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 FAM24BQ8N5W8 94 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ROBO4Q8WZ75 1007 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 FGF11Q92914 225 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ADIPOR1Q96A54 375 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 APH1AQ96BI3 265 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 EDEM2Q9BV94 578 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF391Q9UJN7 358 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 GPR132Q9UNW8 380 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 HOXA1P49639 335 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 PSMB3P49720 205 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ASCL1P50553 236 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 RPP30P78346 268 aaKnown RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 CCL7P80098 99 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 FABP9Q0Z7S8 132 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 PDLIM3Q53GG5 364 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF774Q6NX45 483 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 BRICD5Q6PL45 260 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 OR2C3Q8N628 320 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 MRPL24Q96A35 216 aaKnown RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 TECTBQ96PL2 329 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 KCNK17Q96T54 332 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 NRIP2Q9BQI9 281 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 RSPO3Q9BXY4 272 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 RIMS4Q9H426 269 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 MYOZ1Q9NP98 299 aaPredicted RBP5.9□□□□□ -1.46
CSDE1-205ENST00000438362 RNF150Q9ULK6 438 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 TP53TG5Q9Y2B4 290 aa5.9□□□□□ -1.46
CSDE1-205ENST00000438362 TP53BP1Q12888 1972 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PP11 408 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 C5orf49A4QMS7 147 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF705FA8MVS1 300 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-205ENST00000438362 H3BP45 60 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 TGFBR3LH3BV60 316 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 WDR1O75083 606 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 F12P00748 615 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF705DP0CH99 300 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF705BP0CI00 300 aaPredicted RBP5.9□□□□□ -1.47
CSDE1-205ENST00000438362 PGA3P0DJD8 388 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF32P17041 273 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 CLDN15P56746 228 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 BAXQ07812 192 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 CST9LP1Q5W188 147 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 IFI44Q8TCB0 444 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 RASL10BQ96S79 203 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 SSX3Q99909 188 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 SLC2A8Q9NY64 477 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 GAB2Q9UQC2 676 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 KCNMB2Q9Y691 235 aa5.9□□□□□ -1.47
CSDE1-205ENST00000438362 A0A096LPE4 126 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PPZ6 126 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF727A8MUV8 499 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 H3BMH7 237 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MFNGO00587 321 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MT-CO2P00403 227 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 SERPINA7P05543 415 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 GCH1P30793 250 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 RRADP55042 308 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 AWAT1Q58HT5 328 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 SPANXN5Q5MJ07 72 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 PTCRAQ6ISU1 281 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 GUSBP11Q6P575 273 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ZDHHC23Q8IYP9 409 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 OR2V1Q8NHB1 315 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 TVP23CQ96ET8 276 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 PARP11Q9NR21 331 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 OR5AC2Q9NZP5 309 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MMP24Q9Y5R2 645 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 WSB1Q9Y6I7 421 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 MED19A0JLT2 244 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 C7orf77A4D0Y5 90 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 FAM24AA6NFZ4 105 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 AQP7P3A6NL99 342 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 PRR32B1ATL7 298 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 C17orf112F2Z3M2 114 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 H7BYZ3 331 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ADAM10O14672 748 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ONECUT2O95948 504 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 SPP1P10451 314 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 NFYBP25208 207 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 RAC1P63000 192 aa5.89□□□□□ -1.47
CSDE1-205ENST00000438362 ARF1P84077 181 aaKnown RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 SMAD4Q13485 552 aaKnown RBP5.89□□□□□ -1.47
CSDE1-205ENST00000438362 TSPO2Q5TGU0 170 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms