RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 OR10AC1Q8NH08 325 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 ANGPTL6Q8NI99 470 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 GPR148Q8TDV2 347 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 NRIP2Q9BQI9 281 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 SMURF1Q9HCE7 757 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 SCN3BQ9NY72 215 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 CLEC2DQ9UHP7 191 aa9.51□□□□□ -0.89
COL28A1-203ENST00000435823 SLC1A7O00341 560 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 SIGLEC5O15389 551 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 CD2P06729 351 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 ACAA1P09110 424 aaPredicted RBP9.5□□□□□ -0.89
COL28A1-203ENST00000435823 PSG2P11465 335 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 EPHA1P21709 976 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 POU3F4P49335 361 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 MTCP1P56278 107 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 TAS2R43P59537 309 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 C6orf141Q5SZD1 244 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 SERPINA12Q8IW75 414 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 MKXQ8IYA7 352 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 OR5D14Q8NGL3 314 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 OR13C9Q8NGT0 318 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 MYDGFQ969H8 173 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 DACT3Q96B18 629 aaPredicted RBP9.5□□□□□ -0.89
COL28A1-203ENST00000435823 SMIM19Q96E16 107 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 CEP19Q96LK0 163 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF488Q96MN9 340 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 GAFA1Q96PS6 74 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 ZCCHC4Q9H5U6 513 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 SLC25A10Q9UBX3 287 aaPredicted RBP9.5□□□□□ -0.89
COL28A1-203ENST00000435823 ERGIC3Q9Y282 383 aa9.5□□□□□ -0.89
COL28A1-203ENST00000435823 IGKV1-27A0A075B6S5 117 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 IGKV1-9A0A0C4DH69 117 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 A0A1B0GW55 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 RFPL4AA6NLU0 287 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF879B4DU55 563 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 RFPL4AL1F8VTS6 287 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 OGG1O15527 345 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 TCF21O43680 179 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 MT-ND2P03891 347 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 HCKP08631 526 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L2P0CJ85 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L3P0CJ86 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L4P0CJ87 422 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L5P0CJ88 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L6P0CJ89 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L7P0CJ90 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 AMY2BP19961 511 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 MYF6P23409 242 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 FPR2P25090 351 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 FGF12P61328 243 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 METTL11BQ5VVY1 283 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 XAF1Q6GPH4 301 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4L9Q6RFH8 374 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 FIP1L1Q6UN15 594 aaKnown RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 SLC25A26Q70HW3 274 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 Q8IYB0 196 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 BPIFB2Q8N4F0 458 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 PARP16Q8N5Y8 322 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 TMEM185AQ8NFB2 350 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF418Q8TF45 676 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 SLAMF9Q96A28 289 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 UPRTQ96BW1 309 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 CPNE2Q96FN4 548 aaPredicted RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 SDSLQ96GA7 329 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 ANKRD60Q9BZ19 345 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 HES4Q9HCC6 221 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 FKBP14Q9NWM8 211 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 DUX4Q9UBX2 424 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 OR14J1Q9UGF5 321 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 RPUSD1Q9UJJ7 312 aaKnown RBP9.49□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF222Q9UK12 451 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 NUP50Q9UKX7 468 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 ZNF281Q9Y2X9 895 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 TPRKBQ9Y3C4 175 aa9.49□□□□□ -0.89
COL28A1-203ENST00000435823 MXRA5Q9NR99 2828 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 IGKV1D-17A0A075B6S4 117 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 A0A0A6YYJ9 748 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 PTGES3LE9PB15 166 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 MAGEB3O15480 346 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 SULT1B1O43704 296 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 ALX3O95076 343 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 LALBAP00709 142 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 KNG1P01042 644 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 FSHBP01225 129 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 TFF1P04155 84 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 SELLP14151 372 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 NDUFB7P17568 137 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 RAB3AP20336 220 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 C21orf33P30042 268 aaPredicted RBP9.48□□□□□ -0.89
COL28A1-203ENST00000435823 PRDX2P32119 198 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 VHLP40337 213 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 SOX2P48431 317 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 CAPZA1P52907 286 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 CAV3P56539 151 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 WNT4P56705 351 aa9.48□□□□□ -0.89
COL28A1-203ENST00000435823 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms