RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 FAM90A14PP0C7W9 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM90A24PP0C7X0 464 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 GFRA1P56159 465 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 CLDN15P56746 228 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 FAM3AP98173 230 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 HGFACQ04756 655 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MALLQ13021 153 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 RBM39Q14498 530 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 ZNF273Q14593 569 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TAF9Q16594 264 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 DMRTC1Q5HYR2 192 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PXDC1Q5TGL8 231 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 IL34Q6ZMJ4 242 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 OR1S2Q8NGQ3 325 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SPSB4Q96A44 273 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SAT2Q96F10 170 aaPredicted RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 RRNAD1Q96FB5 475 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 ALKBH3Q96Q83 286 aaPredicted RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 FAAP24Q9BTP7 215 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 C1QTNF5Q9BXJ0 243 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SLC5A7Q9GZV3 580 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 ZNF286AQ9HBT8 521 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 DEPPQ9NTK1 212 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 OR5AC2Q9NZP5 309 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TUBD1Q9UJT1 453 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 NOSIPQ9Y314 301 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 EML6Q6ZMW3 1958 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 KIAA1549Q9HCM3 1950 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 IGKV1-27A0A075B6S5 117 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MPTX1A8MV57 137 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MASP2O00187 686 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PDCD6O75340 191 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MRPL33O75394 65 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 SYNGR4O95473 234 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SFTPBP07988 381 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MMP7P09237 267 aaPredicted RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 COX5BP10606 129 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 NTF4P34130 210 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 UCP3P55916 312 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 S100A10P60903 97 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SIGLEC14Q08ET2 396 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PDZK1IP1Q13113 114 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 IAH1Q2TAA2 248 aaPredicted RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 ABCA11PQ4W5N1 156 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PLCXD3Q63HM9 321 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TMEM211Q6ICI0 200 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 RAB11FIP2Q7L804 512 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TIPARPQ7Z3E1 657 aaKnown RBP9.05□□□□□ -0.96
CD44-210ENST00000434472 TMEM200AQ86VY9 491 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SKA3Q8IX90 412 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 CCDC71LQ8N9Z2 235 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 OR5T2Q8NGG2 359 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SYT3Q9BQG1 590 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 PLEKHA2Q9HB19 425 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 C12orf4Q9NQ89 552 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 ZC4H2Q9NQZ6 224 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 MMP26Q9NRE1 261 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 GSKIPQ9P0R6 139 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
CD44-210ENST00000434472 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 JMJD7P0C870 316 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
CD44-210ENST00000434472 GLP1RP43220 463 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 BLOC1S1P78537 153 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 DEFA5Q01523 94 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 FOXO1Q12778 655 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 ABHD17BQ5VST6 288 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 PSMF1Q92530 271 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 PIGCQ92535 297 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 GALNT14Q96FL9 552 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 LRRC46Q96FV0 321 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 THOC3Q96J01 351 aaKnown RBP9.04□□□□□ -0.96
CD44-210ENST00000434472 GUCD1Q96NT3 240 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 SULT4A1Q9BR01 284 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
CD44-210ENST00000434472 GPR87Q9BY21 358 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 SPRY4Q9C004 299 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 NAA60Q9H7X0 242 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 PRR13Q9NZ81 148 aa9.04□□□□□ -0.96
CD44-210ENST00000434472 FBXO9Q9UK97 447 aaPredicted RBP9.04□□□□□ -0.96
CD44-210ENST00000434472 COLQQ9Y215 455 aaPredicted RBP9.04□□□□□ -0.96
CD44-210ENST00000434472 NCOA6Q14686 2063 aaPredicted RBP9.03□□□□□ -0.96
CD44-210ENST00000434472 MSGN1A6NI15 193 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 C21orf140B9A014 251 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 PLATP00750 562 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 CST4P01036 141 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 GAPDHP04406 335 aaKnown RBP9.03□□□□□ -0.96
CD44-210ENST00000434472 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 HKR1P10072 659 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 FUT3P21217 361 aa9.03□□□□□ -0.96
CD44-210ENST00000434472 RPL12P30050 165 aaKnown RBP9.03□□□□□ -0.96
CD44-210ENST00000434472 RBM11P57052 281 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms