RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 OR10Z1Q8NGY1 313 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 NANPQ8TBE9 248 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 TSEN15Q8WW01 171 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 RFT1Q96AA3 541 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ORAI1Q96D31 301 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 BORCS8Q96FH0 119 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SPACA5Q96QH8 159 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 PCGF1Q9BSM1 259 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 MRI1Q9BV20 369 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 COMMD4Q9H0A8 199 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 TLNRD1Q9H1K6 362 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SMURF1Q9HCE7 757 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 TRIM36Q9NQ86 728 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 INPP5EQ9NRR6 644 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 BABAM2Q9NXR7 383 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 PRR13Q9NZ81 148 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 MTCH1Q9NZJ7 389 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 NLKQ9UBE8 527 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 OPN4Q9UHM6 478 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 HHLA2Q9UM44 414 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 DHDHQ9UQ10 334 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 LRCH1Q9Y2L9 728 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 CAB39Q9Y376 341 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 SOX21Q9Y651 276 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 HSPE1-MOB4S4R3N1 261 aa4.79□□□□□ -1.64
HMGB3P24-201ENST00000433260 ABCA2Q9BZC7 2435 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 FLNAP21333 2647 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGKV1D-17A0A075B6S4 117 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 EFCAB10A6NFE3 127 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 RFPL4AA6NLU0 287 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 C22orf46C9J442 243 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 RFPL4AL1F8VTS6 287 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 J3QLI3 93 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANGPTL7O43827 346 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 GATBO75879 557 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NXPH2O95156 264 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 FSTL3O95633 263 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 HCKP08631 526 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CCDC159P0C7I6 412 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PSG2P11465 335 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NDUFB7P17568 137 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 AZGP1P25311 298 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUSP1P28562 367 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PRDX2P32119 198 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 TGM4P49221 684 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 POU3F4P49335 361 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 RBP2P50120 134 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NPY4RP50391 375 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CAPZA1P52907 286 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 FGF12P61328 243 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PAX8Q06710 450 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SCN1BQ07699 218 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 MED21Q13503 144 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PDCD1Q15116 288 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CNN3Q15417 329 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 DGUOKQ16854 277 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ARMCX4Q5H9R4 360 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 C6orf141Q5SZD1 244 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CD276Q5ZPR3 534 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 RPL22L1Q6P5R6 122 aaKnown RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 IZUMO2Q6UXV1 221 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACP7Q6ZNF0 438 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 Q6ZSR3 168 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SLC25A26Q70HW3 274 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SLC36A1Q7Z2H8 476 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PDZD9Q8IXQ8 264 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 BCL6BQ8N143 479 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CD177Q8N6Q3 437 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NANOGP1Q8N7R0 232 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CCDC54Q8NEL0 328 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM185AQ8NFB2 350 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR5D18Q8NGL1 313 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR13C5Q8NGS8 318 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR13C9Q8NGT0 318 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANGPTL6Q8NI99 470 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PP6455Q8WZ26 134 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SGCDQ92629 289 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SLAMF9Q96A28 289 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 MED30Q96HR3 178 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CNBD2Q96M20 576 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 Q96M66 194 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 GAFA1Q96PS6 74 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NKX3-1Q99801 234 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CHST5Q9GZS9 411 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 CCDC90BQ9GZT6 254 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZCCHC4Q9H5U6 513 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 ELL3Q9HB65 397 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 NEK6Q9HC98 313 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PLCXD1Q9NUJ7 323 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 SCN3BQ9NY72 215 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 RASL12Q9NYN1 266 aa4.78□□□□□ -1.64
HMGB3P24-201ENST00000433260 PSORS1C1Q9UIG5 152 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms