RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 CD63P08962 238 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 FGF5P12034 268 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 LIFP15018 202 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
USP4-205ENST00000431357 GABRR1P24046 479 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 FCGR2CP31995 323 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 MTCP1P56278 107 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 RAB35Q15286 201 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 GALNTL5Q7Z4T8 443 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 TMEM200AQ86VY9 491 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 C20orf196Q8IYI0 205 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 LRRC18Q8N456 261 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 NTNG2Q96CW9 530 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 SF3B5Q9BWJ5 86 aaKnown RBP9.86□□□□□ -0.83
USP4-205ENST00000431357 RYDENQ9NUL5 291 aaKnown RBP9.86□□□□□ -0.83
USP4-205ENST00000431357 WNT16Q9UBV4 365 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 IGKV1D-8A0A087WSZ0 117 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 LY6G6EA0A0G2JKS1 128 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 FBXO24O75426 580 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 LPAR6P43657 344 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 NPBWR1P48145 328 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 RAC1P63000 192 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 RSU1Q15404 277 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 HMGN3Q15651 99 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 RAET1LQ5VY80 246 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 GGNBP1Q5YKI7 109 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 DHRS11Q6UWP2 260 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 ASCL4Q6XD76 172 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 CBLN2Q8IUK8 224 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 M1APQ8TC57 530 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 CYYR1Q96J86 154 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 TMEM231Q9H6L2 316 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 MIOXQ9UGB7 285 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 ZNF391Q9UJN7 358 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 DKKL1Q9UK85 242 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 U3KQA8 63 aa9.86□□□□□ -0.83
USP4-205ENST00000431357 IGHV1-45A0A0A0MS14 117 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 E5RGE8 158 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 FCGR3AP08637 254 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 CST2P09228 141 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 NME2P22392 152 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 CRYGSP22914 178 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 CXCL12P48061 93 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 SSR4P51571 173 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 DVL1P1P54792 670 aaPredicted RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 IL11RAQ14626 422 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 LHFPL2Q6ZUX7 228 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 COMMD1Q8N668 190 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 UBAC2Q8NBM4 344 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 NAT6Q93015 286 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 GALNT14Q96FL9 552 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 IMMP1LQ96LU5 166 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 CMSS1Q9BQ75 279 aaKnown RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 ADAT1Q9BUB4 502 aaKnown RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 SUCNR1Q9BXA5 334 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 UBE2ZQ9H832 354 aaPredicted RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 SEBOXQ9HB31 216 aaPredicted RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 GPR173Q9NS66 373 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 FBXL17Q9UF56 701 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 NSG2Q9Y328 171 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 TERTO14746 1132 aaKnown RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 ZIC3O60481 467 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 ZNF728P0DKX0 622 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 SPEM2Q0P670 501 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 DMRTC1Q5HYR2 192 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 OR2A2Q6IF42 318 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 FOXRED2Q8IWF2 684 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 TDHQ8IZJ6 230 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 GPR137CQ8N3F9 429 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 LRTM2Q8N967 370 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 ZIC4Q8N9L1 334 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 RNASE11Q8TAA1 199 aaKnown RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 GLYATL2Q8WU03 294 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 ZNF775Q96BV0 537 aaPredicted RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 FBXO17Q96EF6 278 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 NAA60Q9H7X0 242 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
USP4-205ENST00000431357 AMDHD2Q9Y303 409 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 FAM96BQ9Y3D0 163 aa9.85□□□□□ -0.83
USP4-205ENST00000431357 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 RANBP2P49792 3224 aaKnown RBP9.84□□□□□ -0.83
USP4-205ENST00000431357 IGHV3-15A0A0B4J1V0 119 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 ZNF850A8MQ14 1090 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 K7ESF4 209 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 CBR3O75828 277 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 FARS2O95363 451 aaKnown RBP9.84□□□□□ -0.83
USP4-205ENST00000431357 KLK3P07288 261 aaPredicted RBP9.84□□□□□ -0.83
USP4-205ENST00000431357 DBHP09172 617 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 CCL3P10147 92 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 RCC1P18754 421 aaPredicted RBP9.84□□□□□ -0.83
USP4-205ENST00000431357 RAB4AP20338 218 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 RBP2P50120 134 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 PIGPP57054 158 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 TMEM33P57088 247 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 TAS2R60P59551 318 aa9.84□□□□□ -0.83
USP4-205ENST00000431357 DEFA6Q01524 100 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms