RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FAM3AP98173 230 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 C2orf76Q3KRA6 126 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 GPR157Q5UAW9 335 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 FAM219AQ8IW50 185 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 WFDC6Q9BQY6 131 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZNF586Q9NXT0 402 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 FUT9Q9Y231 359 aa12.82□□□□□ -0.36
SYNGAP1-203ENST00000428982 KLF4O43474 513 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 IFI6P09912 130 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZNF85Q03923 595 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 TRMT12Q53H54 448 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 SLC18B1Q6NT16 456 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZFP62Q8NB50 900 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 VN1R17PQ8TDU5 208 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 RAB18Q9NP72 206 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 LIPGQ9Y5X9 500 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 A0A0B4J2E0 115 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 A0A1B0GX12 115 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 H0YGG7 62 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 LDB3O75112 727 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZNF20P17024 532 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZBTB25P24278 435 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 IL12BP29460 328 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 NPY4RP50391 375 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 HSF1Q00613 529 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 AADACL3Q5VUY0 350 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 CLEC1AQ8NC01 280 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 RCC1LQ96I51 464 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 SLC41A2Q96JW4 573 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 FBLN7Q53RD9 439 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 KIRREL2Q6UWL6 708 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 NAT6Q93015 286 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ARPC3O15145 178 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 CBR3O75828 277 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZFPL1O95159 310 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 GP1BBP13224 206 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 CD46P15529 392 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 TMEM128Q5BJH2 165 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 OR4K15Q8NH41 348 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 PATE1Q8WXA2 126 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 CCDC74AQ96AQ1 378 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 VSIG4Q9Y279 399 aa12.81□□□□□ -0.36
SYNGAP1-203ENST00000428982 SERINC4A6NH21 518 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 HSD11B2P80365 405 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 PNRC1Q12796 327 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 NR0B2Q15466 257 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 EMC4Q5J8M3 183 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 OR5H2Q8NGV7 314 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 POLR1DQ9Y2S0 133 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZFP92A6NM28 416 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 WDR1O75083 606 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 UMODP07911 640 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 ERVS71-1P61550 626 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 OR9A4Q8NGU2 314 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 ORAOV1Q8WV07 137 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 CYTL1Q9NRR1 136 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 C1QL1O75973 258 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 KRTDAPP60985 99 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 COL10A1Q03692 680 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 SLC22A6Q4U2R8 563 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 OR4A47Q6IF82 309 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 IL22RA1Q8N6P7 574 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 RPUSD4Q96CM3 377 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 PRRX2Q99811 253 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 RARRES2Q99969 163 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 ANGPTL4Q9BY76 406 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 C1orf198Q9H425 327 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 WDR76Q9H967 626 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 B3GAT1Q9P2W7 334 aa12.8□□□□□ -0.36
SYNGAP1-203ENST00000428982 SEC11BP0C7V7 166 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 AMY2BP19961 511 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 MRPL49Q13405 166 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 FCRL6Q6DN72 434 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 CSTL1Q9H114 145 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 NKX2-2O95096 273 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 FOLR1P15328 257 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 PI3P19957 117 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZNF136P52737 540 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ABCA11PQ4W5N1 156 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ZNF595Q8IYB9 648 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 DOK4Q8TEW6 326 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ARSGQ96EG1 525 aa12.79□□□□□ -0.36
SYNGAP1-203ENST00000428982 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms