RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 BDKRB2P30411 391 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 GABRA5P31644 462 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 ERVK11-1P61568 191 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 SEC61A1P61619 476 aaKnown RBP18.63■□□□□ 0.57
PTPN18-205ENST00000428843 DDI2Q5TDH0 399 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 STUMQ69YW2 141 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 ACP7Q6ZNF0 438 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 TMEM91Q6ZNR0 172 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 SATL1Q86VE3 508 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 MKXQ8IYA7 352 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 NEIL1Q96FI4 390 aaPredicted RBP18.63■□□□□ 0.57
PTPN18-205ENST00000428843 CEP19Q96LK0 163 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 LPAR2Q9HBW0 351 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 NLKQ9UBE8 527 aa18.63■□□□□ 0.57
PTPN18-205ENST00000428843 A0A087WXM4 84 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 MAGEA13PA6NCF6 341 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 B4DSR2 109 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 ADAM20O43506 726 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 RGS9O75916 674 aaPredicted RBP18.62■□□□□ 0.57
PTPN18-205ENST00000428843 NXPH2O95156 264 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 CYB5AP00167 134 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 GP2P55259 537 aaKnown RBP18.62■□□□□ 0.57
PTPN18-205ENST00000428843 ZP1P60852 638 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 FABP5Q01469 135 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 NEDD8Q15843 81 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 OR8B3Q8NGG8 313 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 OR8B2Q96RD0 313 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 GPER1Q99527 375 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 NKX3-1Q99801 234 aaPredicted RBP18.62■□□□□ 0.57
PTPN18-205ENST00000428843 HES4Q9HCC6 221 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 NDUFB11Q9NX14 153 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 CTSZQ9UBR2 303 aa18.62■□□□□ 0.57
PTPN18-205ENST00000428843 IGKV1-12A0A0C4DH73 117 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 OR2AT4A6NND4 320 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 F8VVB4 439 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 F8VWA3 439 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 CCRL2O00421 344 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 ANGPTL7O43827 346 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 TGFAP01135 160 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 IGKV1D-12P01611 117 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 TFF1P04155 84 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 UCHL1P09936 223 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 CPT2P23786 658 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 SMIM21Q3B7S5 101 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 NLRC3Q7RTR2 1065 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 OR51F2Q8NH61 342 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 CPNE2Q96FN4 548 aaPredicted RBP18.61■□□□□ 0.57
PTPN18-205ENST00000428843 CCL13Q99616 98 aa18.61■□□□□ 0.57
PTPN18-205ENST00000428843 PPIL3Q9H2H8 161 aaKnown RBP18.61■□□□□ 0.57
PTPN18-205ENST00000428843 CSPG4Q6UVK1 2322 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 MALRD1Q5VYJ5 2156 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 TRAPPC2LH3BP13 241 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 GABRPO00591 440 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 MAS1P04201 325 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 MSMBP08118 114 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 TMEM225BP0DP42 221 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 PSG2P11465 335 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 AMY2BP19961 511 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 BCL3P20749 454 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 ZFP36P26651 326 aaKnown RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 NPBWR2P48146 333 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 PITPNBP48739 271 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 LCN2P80188 198 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 HSD17B12Q53GQ0 312 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 ESCO2Q56NI9 601 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 SYT6Q5T7P8 510 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 ATPAF1Q5TC12 328 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 Q71RC1 249 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 SAXO1Q8IYX7 474 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 ZSCAN4Q8NAM6 433 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 ANGPTL6Q8NI99 470 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 NR1H4Q96RI1 486 aaPredicted RBP18.6■□□□□ 0.57
PTPN18-205ENST00000428843 TCF7L1Q9HCS4 588 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 KAAG1Q9UBP8 84 aa18.6■□□□□ 0.57
PTPN18-205ENST00000428843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.6■□□□□ 0.572e-7■■■■■ 46.6
PTPN18-205ENST00000428843 DOCK11Q5JSL3 2073 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 IGKV1D-17A0A075B6S4 117 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 A0A1B0GW55 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 TMPRSS2O15393 492 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 PHF1O43189 567 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L2P0CJ85 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L3P0CJ86 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L4P0CJ87 422 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L5P0CJ88 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L6P0CJ89 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L7P0CJ90 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 ZNF93P35789 620 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4L9Q6RFH8 374 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-205ENST00000428843 ZNF841Q6ZN19 808 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 LURAP1LQ8IV03 231 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 Q8IYB0 196 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 TNFAIP8L1Q8WVP5 186 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 MUL1Q969V5 352 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 SSBP3Q9BWW4 388 aaPredicted RBP18.59■□□□□ 0.57
PTPN18-205ENST00000428843 SMURF1Q9HCE7 757 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 RBFOX1Q9NWB1 397 aaKnown RBP18.59■□□□□ 0.57
PTPN18-205ENST00000428843 DUX4Q9UBX2 424 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 ARHGAP32A7KAX9 2087 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 ZANQ9Y493 2812 aa18.59■□□□□ 0.57
PTPN18-205ENST00000428843 NKX6-3A6NJ46 265 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms