RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 ACTBP60709 375 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 ACTG1P63261 375 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 HGFACQ04756 655 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 TNK1Q13470 666 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 KLF9Q13886 244 aaPredicted RBP13.72□□□□□ -0.21
AFF3-208ENST00000427118 SNAI3Q3KNW1 292 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 CLVS2Q5SYC1 327 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 AGAP6Q5VW22 663 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 DNM1P46Q6ZS02 220 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 COLCA1Q6ZS62 124 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 ZNF101Q8IZC7 436 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 OR52I2Q8NH67 350 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 SPSB4Q96A44 273 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 URM1Q9BTM9 101 aaKnown RBP13.72□□□□□ -0.21
AFF3-208ENST00000427118 CACNG6Q9BXT2 260 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 CST11Q9H112 138 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 NUBP2Q9Y5Y2 271 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 RTTNQ86VV8 2226 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 NAV3Q8IVL0 2385 aa13.72□□□□□ -0.21
AFF3-208ENST00000427118 H7C417 338 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 LY6G6DO95868 133 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 FAHP16930 419 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 APOBEC3AP31941 199 aaPredicted RBP13.71□□□□□ -0.21
AFF3-208ENST00000427118 ALDH3B1P43353 468 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 EFNB2P52799 333 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 RNASE12Q5GAN4 147 aaKnown RBP13.71□□□□□ -0.21
AFF3-208ENST00000427118 GLIPR1L1Q6UWM5 242 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 BIVMQ86UB2 503 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 AKAP14Q86UN6 197 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 FBXL14Q8N1E6 418 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 MUC15Q8N387 334 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 CELF2-AS1Q8N7Q2 184 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 MAPK1IP1LQ8NDC0 245 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 OR5L1Q8NGL2 311 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 POM121L2Q96KW2 1035 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 NEURL2Q9BR09 285 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 MARVELD1Q9BSK0 173 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 ZNF442Q9H7R0 627 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 PCDHB16Q9NRJ7 776 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 NLKQ9UBE8 527 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 MTFP1Q9UDX5 166 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 ZNF107Q9UII5 783 aaPredicted RBP13.71□□□□□ -0.21
AFF3-208ENST00000427118 SLC7A11Q9UPY5 501 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 RHBDD3Q9Y3P4 386 aa13.71□□□□□ -0.21
AFF3-208ENST00000427118 ANKRD20A5PA0PJZ0 165 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 MEIOCA2RUB1 952 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 TMEM14DPA8MWL7 114 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 SSX4O60224 188 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 DHFRP00374 187 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 FAM157BP0CG42 384 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 RAG2P55895 527 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 ARL6IP1Q15041 203 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 OR8B8Q15620 311 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 KISS1Q15726 138 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 LHFPL2Q6ZUX7 228 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 FTMTQ8N4E7 242 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 SOX7Q9BT81 388 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 MMP28Q9H239 520 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 AUNIPQ9H7T9 357 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 CA10Q9NS85 328 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 CBLN4Q9NTU7 201 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 ETAA1Q9NY74 926 aa13.7□□□□□ -0.22
AFF3-208ENST00000427118 EIF3KQ9UBQ5 218 aaKnown RBP13.7□□□□□ -0.22
AFF3-208ENST00000427118 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 ZNF816-ZNF321PA0A0X1KG74 233 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 C5orf49A4QMS7 147 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 INMT-MINDY4F8WBC2 141 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 NRASP01111 189 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 LPLP06858 475 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 VSIG8P0DPA2 414 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 CCL2P13500 99 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 CCNOP22674 350 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 HLA-DMAP28067 261 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 PTGFRP43088 359 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 RAD52P43351 418 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 RPS23P62266 143 aaKnown RBP13.69□□□□□ -0.22
AFF3-208ENST00000427118 QRFPP83859 136 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 MST1LQ2TV78 715 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 PLA1AQ53H76 456 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 OLFML2AQ68BL7 652 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 CSNK2A3Q8NEV1 391 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 OR56B1Q8NGI3 324 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 ABCA1O95477 2261 aa13.69□□□□□ -0.22
AFF3-208ENST00000427118 IGKV1-9A0A0C4DH69 117 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 C5orf63A6NC05 138 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 HMX3A6NHT5 357 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 ZNF780AO75290 641 aaPredicted RBP13.68□□□□□ -0.22
AFF3-208ENST00000427118 HOXB4P17483 251 aaPredicted RBP13.68□□□□□ -0.22
AFF3-208ENST00000427118 GLRXP35754 106 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 SRP9P49458 86 aaKnown RBP13.68□□□□□ -0.22
AFF3-208ENST00000427118 FUT6P51993 359 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 ATP1B3P54709 279 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 FAM3AP98173 230 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 PLA2G7Q13093 441 aa13.68□□□□□ -0.22
AFF3-208ENST00000427118 UBE2V2Q15819 145 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms