RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 PNMA8CA0A1B0GUJ8 204 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 PQLC2LA1A4F0 135 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 F8VVB4 439 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 F8VWA3 439 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 MYL12BO14950 172 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 SYT7O43581 403 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 ZFPL1O95159 310 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 UBCP0CG48 685 aaKnown RBP10.5□□□□□ -0.73
GPC1-204ENST00000426280 PSG2P11465 335 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 ATP6V1B1P15313 513 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 CEBPDP49716 269 aaPredicted RBP10.5□□□□□ -0.73
GPC1-204ENST00000426280 CCR9P51686 369 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 GNG3P63215 75 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 MED21Q13503 144 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 IRF3Q14653 427 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 SLC9A3R2Q15599 337 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 UBE2V2Q15819 145 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 KCNJ8Q15842 424 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 RBM48Q5RL73 367 aaKnown RBP10.5□□□□□ -0.73
GPC1-204ENST00000426280 C9orf139Q6ZV77 190 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 CALHM1Q8IU99 346 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 Q8N7P7 452 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 ZNF676Q8N7Q3 588 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 NANOGP1Q8N7R0 232 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 ZNRF1Q8ND25 227 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 OR5M11Q96RB7 305 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 MYCBPQ99417 103 aaPredicted RBP10.5□□□□□ -0.73
GPC1-204ENST00000426280 CCDC90BQ9GZT6 254 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 BABAM2Q9NXR7 383 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 DNAJB11Q9UBS4 358 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 ENPP5Q9UJA9 477 aa10.5□□□□□ -0.73
GPC1-204ENST00000426280 DOCK11Q5JSL3 2073 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 TRIM77I1YAP6 450 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 RGS10O43665 173 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 MTRF1O75570 445 aaKnown RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 TOX4O94842 621 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 ACAA1P09110 424 aaPredicted RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 GLRA1P23415 457 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 MAP2K4P45985 399 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 WNT4P56705 351 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 BAMBIQ13145 260 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 CDK5R1Q15078 307 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 ZBTB37Q5TC79 503 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 TMEM244Q5VVB8 128 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 CD276Q5ZPR3 534 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 RPL22L1Q6P5R6 122 aaKnown RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 EGFL6Q8IUX8 553 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 PNKDQ8N490 385 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 TRMT10AQ8TBZ6 339 aaKnown RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 NPRL2Q8WTW4 380 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 ZFAND2BQ8WV99 257 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 LHX4Q969G2 390 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 ADAT3Q96EY9 351 aaPredicted RBP10.49□□□□□ -0.73
GPC1-204ENST00000426280 DCTN5Q9BTE1 182 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 CDCA4Q9BXL8 241 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 CNTD2Q9H8S5 307 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 NLKQ9UBE8 527 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
GPC1-204ENST00000426280 OR2AT4A6NND4 320 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 OGG1O15527 345 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 NDUFB3O43676 98 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 INMTO95050 263 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 ISG15P05161 165 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 PRTN3P24158 256 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 EEF1B2P24534 225 aaKnown RBP10.48□□□□□ -0.73
GPC1-204ENST00000426280 CFPP27918 469 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 HAAOP46952 286 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 GABRA2P47869 451 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 ERVFRD-1P60508 538 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 MRPL28Q13084 256 aaKnown RBP10.48□□□□□ -0.73
GPC1-204ENST00000426280 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 ACP7Q6ZNF0 438 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 FTMTQ8N4E7 242 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 OR13C5Q8NGS8 318 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 OR5AK2Q8NH90 309 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 RPS4Y2Q8TD47 263 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 FGGYQ96C11 551 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 C12orf43Q96C57 262 aaKnown RBP10.48□□□□□ -0.73
GPC1-204ENST00000426280 PRDM13Q9H4Q3 707 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 ABCB9Q9NP78 766 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 TRIM36Q9NQ86 728 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 TNFRSF19Q9NS68 423 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 HHLA2Q9UM44 414 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 ERGIC3Q9Y282 383 aa10.48□□□□□ -0.73
GPC1-204ENST00000426280 LSM2Q9Y333 95 aaKnown RBP10.48□□□□□ -0.73
GPC1-204ENST00000426280 IGKV1-9A0A0C4DH69 117 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 FAM230AA0A1W2PPH8 454 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 A0A1W2PRD5 423 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 A0A1W2PRF3 423 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 A0A1W2PRM7 423 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 OR5B21A6NL26 309 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 RFPL4AA6NLU0 287 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 TMEM212A6NML5 194 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 RFPL4AL1F8VTS6 287 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SIGLEC5O15389 551 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 HOXA3O43365 443 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms