RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 OR56B1Q8NGI3 324 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 OR10R2Q8NGX6 335 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 ST6GAL2Q96JF0 529 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 PCDHB16Q9NRJ7 776 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 MCUBQ9NWR8 336 aa13.38□□□□□ -0.27
SHOX2-202ENST00000425436 PLCE1Q9P212 2302 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 PEX14O75381 377 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 GSTP1P09211 210 aaKnown RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 GTF2F2P13984 249 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 CCR6P51684 374 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 MALLQ13021 153 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 UBE2V2Q15819 145 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 CDNFQ49AH0 187 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 TMEM42Q69YG0 159 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 SFRP4Q6FHJ7 346 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 TCTE3Q8IZS6 198 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 GCDHQ92947 438 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 APOBEC3DQ96AK3 386 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 TMEM59Q9BXS4 323 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 C20orf85Q9H1P6 137 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 KCNK15Q9H427 330 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 MRPL15Q9P015 296 aaKnown RBP13.37□□□□□ -0.27
SHOX2-202ENST00000425436 SLC7A11Q9UPY5 501 aa13.37□□□□□ -0.27
SHOX2-202ENST00000425436 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 C5orf63A6NC05 138 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 GMDSO60547 372 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 CDC14BO60729 498 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF780AO75290 641 aaPredicted RBP13.36□□□□□ -0.27
SHOX2-202ENST00000425436 NDUFB6O95139 128 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 CYB5AP00167 134 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 WNT5AP41221 380 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 OR8B8Q15620 311 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 PNLIPRP3Q17RR3 467 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 ZFP69Q49AA0 526 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 ATAD3CQ5T2N8 411 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 CD276Q5ZPR3 534 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 OR10K2Q6IF99 312 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 STEAP1BQ6NZ63 245 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF782Q6ZMW2 699 aaPredicted RBP13.36□□□□□ -0.27
SHOX2-202ENST00000425436 Q6ZTK2 550 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 LHFPL2Q6ZUX7 228 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 CHST4Q8NCG5 386 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 POM121Q96HA1 1249 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 MED28Q9H204 178 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 SPG11Q96JI7 2443 aa13.36□□□□□ -0.27
SHOX2-202ENST00000425436 POLQO75417 2590 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 A0A0A6YYJ9 748 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 ZNF816-ZNF321PA0A0X1KG74 233 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 hCG_38984A0A1B0GV85 526 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 HS3ST1O14792 307 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 NRASP01111 189 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 NGFP01138 241 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 PTHLHP12272 177 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 TBPP20226 339 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 CBX5P45973 191 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 OR3A4PP47883 348 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 MECP2P51608 486 aaKnown RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 FUT6P51993 359 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 MTCP1P56278 107 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 FAM3AP98173 230 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 MAB21L1Q13394 359 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 MEF2DQ14814 521 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 RBMS2Q15434 407 aaKnown RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 TNFAIP8L1Q8WVP5 186 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 FBXW5Q969U6 566 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 LPAR5Q9H1C0 372 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 OR51J1Q9H342 316 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 GPN1Q9HCN4 374 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 CA10Q9NS85 328 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 MYEF2Q9P2K5 600 aaKnown RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 EIF3KQ9UBQ5 218 aaKnown RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 ING4Q9UNL4 249 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 RAI1Q7Z5J4 1906 aaPredicted RBP13.35□□□□□ -0.27
SHOX2-202ENST00000425436 DSCAMO60469 2012 aa13.35□□□□□ -0.27
SHOX2-202ENST00000425436 J3QW42 95 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ICMTO60725 284 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 CRTAPO75718 401 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 MPIG6BO95866 241 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 IL5P05113 134 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 VEGFCP49767 419 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 RBP2P50120 134 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 FABP6P51161 128 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ATP1B3P54709 279 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 UCP2P55851 309 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 ERVS71-1P61550 626 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 NKX6-1P78426 367 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 FAM89BQ8N5H3 189 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 CSNK2A3Q8NEV1 391 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 OR5L1Q8NGL2 311 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 PIGTQ969N2 578 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 RAB3CQ96E17 227 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 C1orf147Q96MC9 270 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 NKX3-1Q99801 234 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SLC25A21Q9BQT8 299 aaPredicted RBP13.34□□□□□ -0.27
SHOX2-202ENST00000425436 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
SHOX2-202ENST00000425436 SCP2D1Q9UJQ7 156 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms