RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PIFOQ8TCI5 191 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HPSE2Q8WWQ2 592 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CREB3L1Q96BA8 519 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ADI1Q9BV57 179 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 YIPF3Q9GZM5 350 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PBOV1Q9GZY1 135 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GTF2A1LQ9UNN4 478 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SLC22A13Q9Y226 551 aa9.91□□□□□ -0.82
HLA-DQB3-203ENST00000425319 FUOMA2VDF0 154 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DLGAP1O14490 977 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CHST1O43916 411 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 SELENOFO60613 162 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 DHRS3O75911 302 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PSKH1P11801 424 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PIPP12273 146 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ALOX5APP20292 161 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HTR1DP28221 377 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PEX2P28328 305 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 CD83Q01151 205 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HABP2Q14520 560 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 GINS1Q14691 196 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 KHDC1LQ5JSQ8 128 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ASRGL1Q7L266 308 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 KRT74Q7RTS7 529 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 LHFPL4Q7Z7J7 247 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ENTHD1Q8IYW4 607 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNF676Q8N7Q3 588 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 OR51E1Q8TCB6 317 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 LYZL4Q96KX0 146 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 ZNF714Q96N38 554 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 NRIP2Q9BQI9 281 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 PRRG3Q9BZD7 231 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 MED4Q9NPJ6 270 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 IKZF2Q9UKS7 526 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 HILPDAQ9Y5L2 63 aa9.9□□□□□ -0.82
HLA-DQB3-203ENST00000425319 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 K7N7A8 449 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 M0QZK8 103 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DCTN3O75935 186 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CST1P01037 141 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PGA5P0DJD9 388 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 IGHV1-8P0DP01 117 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PAX6P26367 422 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CEACAM3P40198 252 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ACTA2P62736 377 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ACTG2P63267 376 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ACTC1P68032 377 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ACTA1P68133 377 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PPP1R8Q12972 351 aaKnown RBP9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 KLHL22Q53GT1 634 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF626Q68DY1 528 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TRAPPC6BQ86SZ2 158 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CPOQ8IVL8 374 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF679Q8IYX0 411 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 AMELYQ99218 206 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FEVQ99581 238 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MNTQ99583 582 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM107BQ9H098 131 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MOB1AQ9H8S9 216 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PLEKHA1Q9HB21 404 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GPR84Q9NQS5 396 aa9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PAPOLBQ9NRJ5 636 aaKnown RBP9.89□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LOC110117498-PIK3R3F6TDL0 507 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SYNGR1O43759 233 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SASH3O75995 380 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MNDAP41218 407 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MAGEA2P43356 314 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 BLCAPP62952 87 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 COL10A1Q03692 680 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF273Q14593 569 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CCBE1Q6UXH8 406 aaPredicted RBP9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 RTN4RL2Q86UN3 420 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 EGFL6Q8IUX8 553 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 Q8IYB0 196 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 C11orf42Q8N5U0 333 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SNX22Q96L94 193 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CLEC7AQ9BXN2 247 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PKIBQ9C010 78 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LIN7BQ9HAP6 207 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DPM3Q9P2X0 92 aa9.88□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM230AA0A1W2PPH8 454 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PSMD9O00233 223 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TOR1AO14656 332 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM107AO95990 144 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 RAP2AP10114 183 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OSMP13725 252 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ANXA8P13928 327 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PRRX1P54821 245 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GP2P55259 537 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 IL24Q13007 206 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 APOFQ13790 326 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SNAPC1Q16533 368 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 BCL2L15Q5TBC7 163 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 IQCF1Q8N6M8 205 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms