RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 GPR132Q9UNW8 380 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 CACNA1GO43497 2377 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 ANGPTL7O43827 346 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 TRAPPC6AO75865 159 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 SFT2D2O95562 160 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 PATE4P0C8F1 98 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 PRF1P14222 555 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 CNR1P21554 472 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 THBS4P35443 961 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 AIMP2Q13155 320 aaKnown RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 FAM189A2Q15884 450 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 RSPO1Q2MKA7 263 aaPredicted RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 C10orf128Q5T292 105 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 TFAP2EQ6VUC0 442 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 C6orf201Q7Z4U5 140 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 FOXRED2Q8IWF2 684 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 OR14L1PQ8NHC6 308 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 PAQR8Q8TEZ7 354 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 SPTSSAQ969W0 71 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 FER1L6-AS2Q96M78 137 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 OCSTAMPQ9BR26 566 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 HDHD3Q9BSH5 251 aaPredicted RBP9.31□□□□□ -0.92
CUX1-205ENST00000425244 FLVCR1Q9Y5Y0 555 aa9.31□□□□□ -0.92
CUX1-205ENST00000425244 FAM230AA0A1W2PPH8 454 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 VAMP5O95183 116 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 HOXB5P09067 269 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 CD82P27701 267 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 MEOX2P50222 304 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 MTCP1P56278 107 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 PPIAP62937 165 aaKnown RBP9.3□□□□□ -0.92
CUX1-205ENST00000425244 PDSS1Q5T2R2 415 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 ATRAIDQ6UW56 229 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 MOB3CQ70IA8 216 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 ALKBH3Q96Q83 286 aaPredicted RBP9.3□□□□□ -0.92
CUX1-205ENST00000425244 PECRQ9BY49 303 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 CHST5Q9GZS9 411 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 DBX1A6NMT0 343 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 FPR2P25090 351 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 S100A10P60903 97 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 PAN3Q58A45 887 aaKnown RBP9.3□□□□□ -0.92
CUX1-205ENST00000425244 ZNF774Q6NX45 483 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 ZIC4Q8N9L1 334 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 SSC4DQ8WTU2 575 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
CUX1-205ENST00000425244 SGCZQ96LD1 299 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 PIGQQ9BRB3 760 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 RTBDNQ9BSG5 229 aaPredicted RBP9.3□□□□□ -0.92
CUX1-205ENST00000425244 CRLF2Q9HC73 371 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 ACKR4Q9NPB9 350 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 DEPPQ9NTK1 212 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 PLEKHJ1Q9NW61 149 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 ANAPC10Q9UM13 185 aa9.3□□□□□ -0.92
CUX1-205ENST00000425244 A0A0U1RQV5 110 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 H0YIZ8 118 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 KLK10O43240 276 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SPRY1O43609 319 aaPredicted RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 SERPINA5P05154 406 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SFTPBP07988 381 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 RFPL3SP0C7P2 107 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 B4GALT1P15291 398 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 CPT2P23786 658 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 CTSSP25774 331 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 AKR1C2P52895 323 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 TAS2R46P59540 309 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 RAC1P63000 192 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 AKR1C1Q04828 323 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 AADACL3Q5VUY0 350 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 BPIFCQ8NFQ6 507 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 PP6455Q8WZ26 134 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 HAS2Q92819 552 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SCNM1Q9BWG6 230 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 BARX1Q9HBU1 254 aaPredicted RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 V9GYS6 101 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 IGKV1D-8A0A087WSZ0 117 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SGCEO43556 437 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 CBR3O75828 277 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 LCATP04180 440 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 GLAP06280 429 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SFTPCP11686 197 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 ACKR3P25106 362 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 CYCSP99999 105 aaKnown RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 ZNF169Q14929 603 aaPredicted RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 OR1C1Q15619 314 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 DEFB109BQ30KR1 87 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 H3F3CQ6NXT2 135 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 FAM89BQ8N5H3 189 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 ZSCAN4Q8NAM6 433 aaPredicted RBP9.29□□□□□ -0.92
CUX1-205ENST00000425244 OR5AP2Q8NGF4 316 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 OR1S2Q8NGQ3 325 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 AKR7LQ8NHP1 331 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 SCGB3A2Q96PL1 93 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 RNF126Q9BV68 326 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 NMES1Q9C002 83 aa9.29□□□□□ -0.92
CUX1-205ENST00000425244 OR2S2Q9NQN1 319 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms