RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 IGSF11Q5DX21 431 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 AADACL3Q5VUY0 350 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF529Q6P280 563 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 SLC25A42Q86VD7 318 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 C17orf50Q8WW18 174 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RTBDNQ9BSG5 229 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 H3BUI4 141 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 LYZL6O75951 148 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 VAMP5O95183 116 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 GFRA1P56159 465 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RAB1AP62820 205 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 C10orf128Q5T292 105 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 SLC22A25Q6T423 547 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZGRF1Q86YA3 2104 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CDH26Q8IXH8 852 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RDH5Q92781 318 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 HAS2Q92819 552 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CMSS1Q9BQ75 279 aaKnown RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 SCPEP1Q9HB40 452 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 FANCFQ9NPI8 374 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 LSM5Q9Y4Y9 91 aaKnown RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 FBXO24O75426 580 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 APOC3P02656 99 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RAB6AP20340 208 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CNR1P21554 472 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 RAB32Q13637 225 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 HNF4GQ14541 408 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 MCEMP1Q8IX19 187 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZSCAN4Q8NAM6 433 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZBTB44Q8NCP5 570 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 OR10AD1Q8NGE0 317 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CPT1CQ8TCG5 803 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 CPNE2Q96FN4 548 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF552Q9H707 407 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF703Q9H7S9 590 aaPredicted RBP10.33□□□□□ -0.76
PTPRN-204ENST00000423636 MED13LQ71F56 2210 aa10.33□□□□□ -0.76
PTPRN-204ENST00000423636 ICAM2P13598 275 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RCC1P18754 421 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 LHX2P50458 406 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 NHLRC3Q5JS37 347 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 NSUN5P2Q63ZY6 315 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 OR2T2Q6IF00 324 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 HDDC2Q7Z4H3 204 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ZNF611Q8N823 705 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 CNEP1R1Q8N9A8 125 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ADGRG7Q96K78 797 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 CDC6Q99741 560 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 BOKQ9UMX3 212 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 TNRC6AQ8NDV7 1962 aaKnown RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 GJE1A6NN92 205 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 B4E171 279 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 SYNGR1O43759 233 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 MTRF1O75570 445 aaKnown RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 TSPAN7P41732 249 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RBP2P50120 134 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 MEF2DQ14814 521 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 C11orf87Q6NUJ2 197 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ATRAIDQ6UW56 229 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 THAP6Q8TBB0 222 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 MED30Q96HR3 178 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 SLCO5A1Q9H2Y9 848 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 TIMM10BQ9Y5J6 103 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ARHGAP21Q5T5U3 1957 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ABCA4P78363 2273 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RNF222A6NCQ9 220 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RFPL4AA6NLU0 287 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RFPL4AL1F8VTS6 287 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 AGFG2O95081 481 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 BCL3P20749 454 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 CRYGSP22914 178 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 TRIP6Q15654 476 aaKnown RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ALKBH6Q3KRA9 238 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 OR2A2Q6IF42 318 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 Q6ZPA2 131 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 SPERTQ8NA61 448 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ADPRHL1Q8NDY3 354 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 RBPMSQ93062 196 aaKnown RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 PLPPR2Q96GM1 343 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 FGF23Q9GZV9 251 aaPredicted RBP10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ASF1BQ9NVP2 202 aa10.32□□□□□ -0.76
PTPRN-204ENST00000423636 ARFGEF3Q5TH69 2177 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 SULT1C2O00338 296 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 OR5H8P0DN80 308 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 PTGER4P35408 488 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 CLDN18P56856 261 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 SCAND1P57086 179 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 IZUMO4Q1ZYL8 232 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 RPUSD3Q6P087 351 aaKnown RBP10.31□□□□□ -0.76
PTPRN-204ENST00000423636 TMEM65Q6PI78 240 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 SUN5Q8TC36 379 aa10.31□□□□□ -0.76
PTPRN-204ENST00000423636 MOB1AQ9H8S9 216 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms