RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PLATP00750 562 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 PSG2P11465 335 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ATF1P18846 271 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 MPZP25189 248 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 RBP2P50120 134 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 BPIFB3P59826 476 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 IL24Q13007 206 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 KRTAP24-1Q3LI83 254 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4L9Q6RFH8 374 aaPredicted RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 FIP1L1Q6UN15 594 aaKnown RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 LHFPL2Q6ZUX7 228 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 UTS2BQ765I0 119 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ANGPTL5Q86XS5 388 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 CALHM1Q8IU99 346 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DNAAF1Q8NEP3 725 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 TMEM185AQ8NFB2 350 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ZFAND2BQ8WV99 257 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ADAT3Q96EY9 351 aaPredicted RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 TMEM80Q96HE8 168 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DMRTB1Q96MA1 342 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ZNF488Q96MN9 340 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 GAFA1Q96PS6 74 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 NRIP2Q9BQI9 281 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 C19orf24Q9BVV8 132 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 VCX3BQ9H321 246 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 CNTD2Q9H8S5 307 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ONECUT1Q9UBC0 465 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 ZNF69Q9UC07 566 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 DHDHQ9UQ10 334 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 CAB39Q9Y376 341 aaPredicted RBP9.06□□□□□ -0.96
USP49-204ENST00000423567 WNK2Q9Y3S1 2297 aa9.06□□□□□ -0.96
USP49-204ENST00000423567 IGKV1D-17A0A075B6S4 117 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 A0A1W2PQ09 198 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 EFCAB10A6NFE3 127 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 RFPL4AA6NLU0 287 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 RFPL4AL1F8VTS6 287 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 ZFPL1O95159 310 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 VENTXO95231 258 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 LIMS3P0CW19 117 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 LIMS4P0CW20 117 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 AZGP1P25311 298 aaKnown RBP9.05□□□□□ -0.96
USP49-204ENST00000423567 POU3F4P49335 361 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 MTCP1P56278 107 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 CAV3P56539 151 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 ARF6P62330 175 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 PDCD1Q15116 288 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 DGUOKQ16854 277 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 RPL22L1Q6P5R6 122 aaKnown RBP9.05□□□□□ -0.96
USP49-204ENST00000423567 SLC25A26Q70HW3 274 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 PHC2Q8IXK0 858 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 MKXQ8IYA7 352 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 Q8IYB0 196 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 ZNF561Q8N587 486 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 OR13C9Q8NGT0 318 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 SPSB1Q96BD6 273 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 CPNE2Q96FN4 548 aaPredicted RBP9.05□□□□□ -0.96
USP49-204ENST00000423567 SDSLQ96GA7 329 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 CEP19Q96LK0 163 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 WDFY2Q96P53 400 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 OPALINQ96PE5 141 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 PDCD1LG2Q9BQ51 273 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 ZNF649Q9BS31 505 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 DCTN5Q9BTE1 182 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 OR14J1Q9UGF5 321 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 KPTNQ9Y664 436 aa9.05□□□□□ -0.96
USP49-204ENST00000423567 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 A0A1W2PPH5 198 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 E9PI62 339 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 INMTO95050 263 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 KNG1P01042 644 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 CD2P06729 351 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 GNAO1P09471 354 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 PIPP12273 146 aaPredicted RBP9.04□□□□□ -0.96
USP49-204ENST00000423567 SELLP14151 372 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 AMY2BP19961 511 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 PRDX2P32119 198 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ETV1P50549 477 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ST3GAL4Q11206 333 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 BLMHQ13867 455 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 C9orf139Q6ZV77 190 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 SERPINA12Q8IW75 414 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 BATF2Q8N1L9 274 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 FGFRL1Q8N441 504 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 STX19Q8N4C7 294 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 KIR3DL3Q8N743 410 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 SIGLECL1Q8N7X8 197 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 ZNRF1Q8ND25 227 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 OR51A4Q8NGJ6 313 aa9.04□□□□□ -0.96
USP49-204ENST00000423567 OR5D14Q8NGL3 314 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms