RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DMDP11532 3685 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TRAV17A0A0B4J275 112 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 A6NL46 340 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PDCD6O75340 191 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 GABRR1P24046 479 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 EIF2S3P41091 472 aaKnown RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 RBM11P57052 281 aaKnown RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SORDQ00796 357 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MRPL49Q13405 166 aaKnown RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 HLXQ14774 488 aaPredicted RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C2orf68Q2NKX9 166 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MPV17LQ2QL34 196 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CEACAM21Q3KPI0 293 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 TMEM211Q6ICI0 200 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 SPACA1Q9HBV2 294 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 C12orf4Q9NQ89 552 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 MEMO1Q9Y316 297 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
HLA-DPA1-242ENST00000419277 IGKV1-27A0A075B6S5 117 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PQLC2LA1A4F0 135 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 AKR1C4P17516 323 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 RAB1AP62820 205 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 AADACL3Q5VUY0 350 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ACOT7LQ6ZUV0 252 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 C6orf201Q7Z4U5 140 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 KCNRGQ8N5I3 272 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR5A2Q8NGI9 324 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR1K1Q8NGR3 316 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR10K1Q8NGX5 313 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FGFBP3Q8TAT2 258 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 GTF3AQ92664 365 aaKnown RBP12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 BOD1Q96IK1 185 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 POM121L2Q96KW2 1035 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ST6GALNAC5Q9BVH7 336 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FN3KRPQ9HA64 309 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ZNF286AQ9HBT8 521 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TMEM165Q9HC07 324 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 LOC100509620A0A075B734 347 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PIGBOS1A0A0B4J2F0 54 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 KANTRA0A1W2PQU2 76 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 C5orf49A4QMS7 147 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 SIX6O95475 246 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PATE4P0C8F1 98 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 RRASP10301 218 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FUT3P21217 361 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 C17orf107Q6ZR85 190 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 DEFB124Q8NES8 71 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR56B2PQ8NGI1 322 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR51F2Q8NH61 342 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PPP1R1CQ8WVI7 109 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PIGCQ92535 297 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 HIST1H2AAQ96QV6 131 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PAPOLGQ9BWT3 736 aaKnown RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FAM86C1Q9NVL1 165 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ST3GAL6Q9Y274 331 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 ZNF407Q9C0G0 2248 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TRAV14DV4A0A0A6YYC5 116 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 GLAP06280 429 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CRHP06850 196 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FCGR3AP08637 254 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TUBG1P23258 451 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 THOC7Q6I9Y2 204 aaKnown RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 UNQ6126/PRO20091Q6UXV3 157 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OR10AD1Q8NGE0 317 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 WDR89Q96FK6 387 aaPredicted RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 RIMS4Q9H426 269 aaPredicted RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CHMP1AQ9HD42 196 aaPredicted RBP12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TUBG2Q9NRH3 451 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 C1orf123Q9NWV4 160 aa12.57□□□□□ -0.4
HLA-DPA1-242ENST00000419277 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 AQP7O14520 342 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 SPRY1O43609 319 aaPredicted RBP12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 IGHV3-9P01782 118 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 HLA-HP01893 362 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CD79AP11912 226 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PSMB6P28072 239 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 GLP1RP43220 463 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 NPY4RP50391 375 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 UCP3P55916 312 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 FGF12P61328 243 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 PRDX4Q13162 271 aa12.56□□□□□ -0.4
HLA-DPA1-242ENST00000419277 TAF9Q16594 264 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms