RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 PHF7Q9BWX1 381 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 TGIF2Q9GZN2 237 aa13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 CHST5Q9GZS9 411 aa13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 AKIRIN1Q9H9L7 192 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 FBXO7Q9Y3I1 522 aa13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 KPTNQ9Y664 436 aa13.26□□□□□ -0.29
SEMA3B-203ENST00000419007 FRYLO94915 3013 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 IFNA4P05014 189 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 CTSDP07339 412 aaPredicted RBP13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 ACAA1P09110 424 aaPredicted RBP13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 ZNF728P0DKX0 622 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC35A1P78382 337 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 PP6455Q8WZ26 134 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 GNRHR2Q96P88 292 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 NELFAQ9H3P2 528 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 ZNF44P15621 663 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 GUK1Q16774 197 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 HIST1H2BAQ96A08 127 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 AK3Q9UIJ7 227 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 EXPH5Q8NEV8 1989 aa13.25□□□□□ -0.29
SEMA3B-203ENST00000419007 A0A1W2PPH5 198 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 C7orf77A4D0Y5 90 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ARL6IP1Q15041 203 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC25A53Q5H9E4 307 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 CARFQ8N187 725 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ZNF837Q96EG3 531 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ARG1P05089 322 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 CELA2AP08217 269 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 MEX3BQ6ZN04 569 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ZNF574Q6ZN55 896 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 HDGFL3Q9Y3E1 203 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 hCG_1809904A0A1W2PP81 198 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 A0A1W2PR64 198 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 A0A1W2PRV1 198 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 GAPDHP04406 335 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 CEBPGP53567 150 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 OR2B8PP59922 312 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ENDOGQ14249 297 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 ADAM5Q6NVV9 412 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 RABEPKQ7Z6M1 372 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
SEMA3B-203ENST00000419007 NHLH2Q02577 135 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 PLXDC2Q6UX71 529 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 KMT5CQ86Y97 462 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 C15orf54Q8N8G6 183 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ADPRHL1Q8NDY3 354 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC25A43Q8WUT9 341 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 TM2D1Q9BX74 207 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ULBP2Q9BZM5 246 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 METTL9Q9H1A3 318 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 LUZP4Q9P127 313 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 RARRES3Q9UL19 164 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 FAM186AA6NE01 2351 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 E5RGE8 158 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ETV2O00321 342 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 PATE4P0C8F1 98 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ACKR3P25106 362 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 LSM6P62312 80 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 FAM3AP98173 230 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 KCNMB1Q16558 191 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 RSPO1Q2MKA7 263 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 WDR74Q6RFH5 385 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 FBXW12Q6X9E4 464 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 FAM24BQ8N5W8 94 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 DMBX1Q8NFW5 382 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 OR11L1Q8NGX0 322 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 Q96M66 194 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 PLEKHA2Q9HB19 425 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 TUBD1Q9UJT1 453 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 NSG2Q9Y328 171 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 URB1O60287 2271 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 A0A1W2PPE3 182 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 UMAD1C9J7I0 102 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC33A1O00400 549 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 DHHO43323 396 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 NOVA1P51513 510 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 ZNF133P52736 654 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 PIGYQ3MUY2 71 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 SLC22A25Q6T423 547 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 OR52M1Q8NGK5 317 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 SPTSSAQ969W0 71 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 TIMM10BQ9Y5J6 103 aa13.23□□□□□ -0.29
SEMA3B-203ENST00000419007 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
SEMA3B-203ENST00000419007 A0A0U1RQV5 110 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms