RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SFTA3P0C7M3 94 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 COX6A1P12074 109 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 HIST1H3AP68431 136 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 FLI1Q01543 452 aaPredicted RBP12.6□□□□□ -0.39
HDAC9-208ENST00000417496 HIST2H3PS2Q5TEC6 136 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 LYSMD4Q5XG99 296 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 HIST2H3AQ71DI3 136 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 LINC00518Q8N0U6 118 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 SEC11CQ9BY50 192 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 DNAJB11Q9UBS4 358 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 IGKV1-12A0A0C4DH73 117 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 XRCC2O43543 280 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 EIF1BO60739 113 aaKnown RBP12.6□□□□□ -0.39
HDAC9-208ENST00000417496 IGKV1D-12P01611 117 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 OR5AC1P0C628 307 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 DSCR4P56555 118 aaPredicted RBP12.6□□□□□ -0.39
HDAC9-208ENST00000417496 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 ANGPTL4Q9BY76 406 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 NDRG3Q9UGV2 375 aa12.6□□□□□ -0.39
HDAC9-208ENST00000417496 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 DEDDO75618 318 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 SNAPINO95295 136 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 ONECUT2O95948 504 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 F10P00742 488 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 ZNF84P51523 738 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 SURF2Q15527 256 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-208ENST00000417496 FAM27BQ5VT28 67 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 DHRS7BQ6IAN0 325 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-208ENST00000417496 OPN5Q6U736 354 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 IL34Q6ZMJ4 242 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 OR11L1Q8NGX0 322 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 PRRX2Q99811 253 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
HDAC9-208ENST00000417496 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 MEMO1Q9Y316 297 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
HDAC9-208ENST00000417496 FHITP49789 147 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 SSR4P51571 173 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 PDZK1IP1Q13113 114 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 Q6ZRG5 221 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 IFI44Q8TCB0 444 aa12.59□□□□□ -0.39
HDAC9-208ENST00000417496 CST4P01036 141 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 IGHV3-9P01782 118 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 CTSDP07339 412 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 FCGR3AP08637 254 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 NR2C1P13056 603 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF32P17041 273 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 CRYGSP22914 178 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 FKBP2P26885 142 aaKnown RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 PLXDC2Q6UX71 529 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 FOXL2NBQ6ZUU3 175 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 RPS19BP1Q86WX3 136 aaKnown RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 FBXL14Q8N1E6 418 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 OR10AD1Q8NGE0 317 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 OR5L1Q8NGL2 311 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 WNT16Q9UBV4 365 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 A0A087WZY1 265 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 LOC102723996A0A087X1L8 192 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 SYNGR3O43761 229 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 C1QL1O75973 258 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 VAMP5O95183 116 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 IFNA21P01568 189 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 CFIP05156 583 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 CRYBA1P05813 215 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 KLK3P07288 261 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 ASCL1P50553 236 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 DHRS11Q6UWP2 260 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 BTNL8Q6UX41 500 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 RXFP4Q8TDU9 374 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
HDAC9-208ENST00000417496 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
HDAC9-208ENST00000417496 PATE3B3GLJ2 98 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 SPP1P10451 314 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 SULT1A2P50226 295 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 RPS18P62269 152 aaKnown RBP12.57□□□□□ -0.4
HDAC9-208ENST00000417496 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
HDAC9-208ENST00000417496 SLC22A25Q6T423 547 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 Q6ZPA2 131 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 SECTM1Q8WVN6 248 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 BORCS8Q96FH0 119 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF175Q9Y473 711 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 NME2P1O60361 137 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF728P0DKX0 622 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 HTR5AP47898 357 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 KCNJ3P48549 501 aa12.57□□□□□ -0.4
HDAC9-208ENST00000417496 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
HDAC9-208ENST00000417496 RAC1P63000 192 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms