RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 A0A1W2PRM7 423 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 A6NIN4 97 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 M0QZ24 198 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 EI24O14681 340 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 SYT7O43581 403 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 SYNGR1O43759 233 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 KLRD1Q13241 179 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 HRASLS5Q96KN8 279 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 SLC7A11Q9UPY5 501 aa20.71■□□□□ 0.91
VEGFA-208ENST00000417285 hCG_1809904A0A1W2PP81 198 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 A0A1W2PPE2 198 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 A0A1W2PR64 198 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 A0A1W2PRV1 198 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 ANKRD61A6NGH8 418 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 H3BNX3 289 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 NXPH2O95156 264 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 ALDH3A2P51648 485 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 PRB3Q04118 309 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-208ENST00000417285 DHRS7BQ6IAN0 325 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-208ENST00000417285 FAM185AQ8N0U4 392 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 CD177Q8N6Q3 437 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 BEND2Q8NDZ0 799 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 ZNF488Q96MN9 340 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 NRIP2Q9BQI9 281 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 FAM234AQ9H0X4 552 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 HEXA-AS1Q9H8Q6 139 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 ELL3Q9HB65 397 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-208ENST00000417285 GNG8Q9UK08 70 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 NOTCH1P46531 2555 aa20.7■□□□□ 0.9
VEGFA-208ENST00000417285 GATBO75879 557 aaKnown RBP20.69■□□□□ 0.9
VEGFA-208ENST00000417285 TSPAN9O75954 239 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 MPZP25189 248 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 DLX1P56177 255 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 PROK1P58294 105 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 RPL31P62899 125 aaKnown RBP20.69■□□□□ 0.9
VEGFA-208ENST00000417285 MEDAGQ5VYS4 303 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 Q6ZSV7 163 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 PKIBQ9C010 78 aa20.69■□□□□ 0.9
VEGFA-208ENST00000417285 UBCP0CG48 685 aaKnown RBP20.68■□□□□ 0.9
VEGFA-208ENST00000417285 ACTC1P68032 377 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 ACTA1P68133 377 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 ZNF85Q03923 595 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 SLC25A30Q5SVS4 291 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 TMEM200BQ69YZ2 307 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 PNKDQ8N490 385 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 TRMT10AQ8TBZ6 339 aaKnown RBP20.68■□□□□ 0.9
VEGFA-208ENST00000417285 UBE2FQ969M7 185 aa20.68■□□□□ 0.9
VEGFA-208ENST00000417285 FAM230AA0A1W2PPH8 454 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 SNTNA6NMZ2 147 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 H3BSH0 61 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 ENTPD6O75354 484 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 ISL1P61371 349 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 SNRPGP62308 76 aaKnown RBP20.67■□□□□ 0.9
VEGFA-208ENST00000417285 IL24Q13007 206 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 ZIK1Q3SY52 487 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-208ENST00000417285 TP53I3Q53FA7 332 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 KCTD20Q7Z5Y7 419 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 CALHM1Q8IU99 346 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 PRSS35Q8N3Z0 413 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 C10orf35Q96D05 121 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 RNFT2Q96EX2 444 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 HES4Q9HCC6 221 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 C19orf12Q9NSK7 152 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 WNK1Q9H4A3 2382 aa20.67■□□□□ 0.9
VEGFA-208ENST00000417285 ANGPTL7O43827 346 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 SERPINA3P01011 423 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 KRTAP10-3P60369 221 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 AANATQ16613 207 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 HCP5Q6MZN7 132 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 ANGPTL5Q86XS5 388 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 CBR4Q8N4T8 237 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 CHST5Q9GZS9 411 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 MEGF9Q9H1U4 602 aa20.66■□□□□ 0.9
VEGFA-208ENST00000417285 LOC107986453A0A1B0GWG9 222 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 DAPL1A0PJW8 107 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 KCNAB3O43448 404 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 FUT6P51993 359 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 ERVK11-1P61568 191 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 UBE2V2Q15819 145 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 BATF2Q8N1L9 274 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 C9orf16Q9BUW7 83 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 MMP27Q9H306 513 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 TCF7L1Q9HCS4 588 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 OR14J1Q9UGF5 321 aa20.65■□□□□ 0.9
VEGFA-208ENST00000417285 E9PQ18 207 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 TK1P04183 234 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 CEBPDP49716 269 aaPredicted RBP20.64■□□□□ 0.89
VEGFA-208ENST00000417285 CNN3Q15417 329 aaKnown RBP20.64■□□□□ 0.89
VEGFA-208ENST00000417285 TMEM244Q5VVB8 128 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 ASPHD2Q6ICH7 369 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 MKXQ8IYA7 352 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 PP6455Q8WZ26 134 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 SSX3Q99909 188 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 GMPPBQ9Y5P6 360 aa20.64■□□□□ 0.89
VEGFA-208ENST00000417285 J3QRE1 110 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 KIR3DL2P43630 455 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 C11orf42Q8N5U0 333 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 DTX3Q8N9I9 347 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 OR2G2Q8NGZ5 317 aa20.63■□□□□ 0.89
VEGFA-208ENST00000417285 BORCS8Q96FH0 119 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms