RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CCR9P51686 369 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 DLX1P56177 255 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 ACTA2P62736 377 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 ACTG2P63267 376 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-204ENST00000417122 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.36
ITGB1-204ENST00000417122 C1orf122Q6ZSJ8 110 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 LHFPL3Q86UP9 236 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 FAM185AQ8N0U4 392 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 STMN2Q93045 179 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 BORCS8Q96FH0 119 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
ITGB1-204ENST00000417122 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 MYCBPQ99417 103 aaPredicted RBP12.83□□□□□ -0.36
ITGB1-204ENST00000417122 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
ITGB1-204ENST00000417122 IGKV1-27A0A075B6S5 117 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 KLRD1Q13241 179 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 BLMHQ13867 455 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 GALEQ14376 348 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 ZSCAN26Q16670 478 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 TMEM86BQ8N661 226 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 TAF15Q92804 592 aaKnown RBP eCLIP12.82□□□□□ -0.36
ITGB1-204ENST00000417122 TNFRSF14Q92956 283 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 FGGYQ96C11 551 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 ADAT3Q96EY9 351 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-204ENST00000417122 PELI1Q96FA3 418 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 CEP19Q96LK0 163 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 ALG8Q9BVK2 526 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 METTL8Q9H825 291 aaKnown RBP12.82□□□□□ -0.36
ITGB1-204ENST00000417122 MTCH1Q9NZJ7 389 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 CAB39Q9Y376 341 aaPredicted RBP12.82□□□□□ -0.36
ITGB1-204ENST00000417122 POMT1Q9Y6A1 747 aa12.82□□□□□ -0.36
ITGB1-204ENST00000417122 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 KNG1P01042 644 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 IGHA1P01876 353 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ZNF20P17024 532 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 EEF1B2P24534 225 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 RBP2P50120 134 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ATP1B3P54709 279 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 RAB40BQ12829 278 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ALKBH1Q13686 389 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 NCR3LG1Q68D85 454 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 FIP1L1Q6UN15 594 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 DNAAF1Q8NEP3 725 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ZNF555Q8NEP9 628 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 SSMEM1Q8WWF3 244 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 SLAMF9Q96A28 289 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 RDH12Q96NR8 316 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ISG20L2Q9H9L3 353 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 UNKLQ9H9P5 680 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 INPP5EQ9NRR6 644 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 C19orf12Q9NSK7 152 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 SMPD3Q9NY59 655 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 HHLA2Q9UM44 414 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
ITGB1-204ENST00000417122 RPL36Q9Y3U8 105 aaKnown RBP12.81□□□□□ -0.36
ITGB1-204ENST00000417122 IGKV1-9A0A0C4DH69 117 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 A0A1W2PRD5 423 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 A0A1W2PRF3 423 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 A0A1W2PRM7 423 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 FAM181BA6NEQ2 426 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 F8VVB4 439 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 F8VWA3 439 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 H0YAE9 185 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 NPFFO15130 113 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 INMTO95050 263 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 TK1P04183 234 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 ATF1P18846 271 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 UBE2E1P51965 193 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 RPL31P62899 125 aaKnown RBP12.8□□□□□ -0.36
ITGB1-204ENST00000417122 SLC25A26Q70HW3 274 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 UTS2BQ765I0 119 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 LDLRAD3Q86YD5 345 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 EGFL6Q8IUX8 553 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 ZNF676Q8N7Q3 588 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 OR5D13Q8NGL4 314 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 OR13C3Q8NGS6 347 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 OR10AC1Q8NH08 325 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 ZNF649Q9BS31 505 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 ZNF747Q9BV97 191 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 FAM234AQ9H0X4 552 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 MRPS18AQ9NVS2 196 aaKnown RBP12.8□□□□□ -0.36
ITGB1-204ENST00000417122 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
ITGB1-204ENST00000417122 A0A1W2PPH5 198 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 IGHV4-59P01825 116 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 CRYBA1P05813 215 aa12.79□□□□□ -0.36
ITGB1-204ENST00000417122 CHRM2P08172 466 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms