RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 Q6ZPA2 131 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 ASRGL1Q7L266 308 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 Q8N2B8 174 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 APOL4Q9BPW4 351 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 SERTAD4Q9NUC0 356 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 DNAJB9Q9UBS3 223 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 OR14J1Q9UGF5 321 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 GTF2A1LQ9UNN4 478 aa11.98□□□□□ -0.49
RPS28-201ENST00000417088 A6NIN4 97 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 LOC110117498-PIK3R3F6TDL0 507 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 PRKYO43930 277 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 CBX1P83916 185 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 FAM189A2Q15884 450 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 PLA1AQ53H76 456 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 LDLRAD2Q5SZI1 272 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 ZNF322Q6U7Q0 402 aaPredicted RBP11.97□□□□□ -0.49
RPS28-201ENST00000417088 Q6ZSR3 168 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
RPS28-201ENST00000417088 ANGPTL5Q86XS5 388 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 ELMOD2Q8IZ81 293 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 CNN2Q99439 309 aaKnown RBP11.97□□□□□ -0.49
RPS28-201ENST00000417088 CDCA4Q9BXL8 241 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 MOB1AQ9H8S9 216 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 TCF19Q9Y242 345 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 R4GMQ9 66 aa11.97□□□□□ -0.49
RPS28-201ENST00000417088 A6NDX4 124 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 ODF3BA8MYP8 253 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 K7N7A8 449 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 FKBP6O75344 327 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 FBXO24O75426 580 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 CD28P10747 220 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 CXCR4P61073 352 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 ESRRGP62508 458 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 COL10A1Q03692 680 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 PTGES3Q15185 160 aaKnown RBP11.96□□□□□ -0.49
RPS28-201ENST00000417088 NSUN5P1Q3KNT7 163 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 BCL2L15Q5TBC7 163 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 FAHD1Q6P587 224 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 PLEKHG7Q6ZR37 379 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 MEPCEQ7L2J0 689 aaKnown RBP11.96□□□□□ -0.49
RPS28-201ENST00000417088 SPATA24Q86W54 205 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 CCDC197Q8NCU1 140 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 DNAJC9Q8WXX5 260 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 MALSU1Q96EH3 234 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.49
RPS28-201ENST00000417088 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.49
RPS28-201ENST00000417088 OR52A1Q9UKL2 312 aa11.96□□□□□ -0.49
RPS28-201ENST00000417088 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
RPS28-201ENST00000417088 MEX3AA1L020 520 aaKnown RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 M0R129 80 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 ARG1P05089 322 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 ZNF728P0DKX0 622 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 DAPP51397 102 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 EFNB1P98172 346 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 EMX1Q04741 257 aaPredicted RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 IL24Q13007 206 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 CNN3Q15417 329 aaKnown RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 SSX2Q16385 188 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 AADACL4Q5VUY2 407 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 REC114Q7Z4M0 266 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 TMEM219Q86XT9 240 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 ASCC1Q8N9N2 400 aaKnown RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 OR11H6Q8NGC7 330 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 OR13D1Q8NGV5 346 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 TRMT10AQ8TBZ6 339 aaKnown RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 RPS4Y2Q8TD47 263 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 WIPF2Q8TF74 440 aaPredicted RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 FOXRED1Q96CU9 486 aaPredicted RBP11.95□□□□□ -0.5
RPS28-201ENST00000417088 NRBF2Q96F24 287 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 MNTQ99583 582 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 PKIBQ9C010 78 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 MMP28Q9H239 520 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 ADGRL4Q9HBW9 690 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 SLC22A13Q9Y226 551 aa11.95□□□□□ -0.5
RPS28-201ENST00000417088 TCRBV3S1A0A5B6 114 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 DHRS7CA6NNS2 312 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 ADARB2-AS1A8MUL3 147 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 ZNF670-ZNF695F2Z2N8 137 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 F8VVB4 439 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 F8VWA3 439 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 PIN1P1O15428 100 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 XPNPEP2O43895 674 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 ZNF737O75373 536 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 FAM107AO95990 144 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 RBP4P02753 201 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 CHRM2P08172 466 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 IGHV1-8P0DP01 117 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 CCL1P22362 96 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 EDDM3BP56851 147 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 ACTR3P61158 418 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 FLOT2Q14254 428 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 TCF23Q7RTU1 214 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 NDUFA11Q86Y39 141 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
RPS28-201ENST00000417088 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms