RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-202ENST00000416769 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 LGALS8O00214 317 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 TBX1O43435 398 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 XRCC2O43543 280 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 FSTL3O95633 263 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 LALBAP00709 142 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 TFF1P04155 84 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 IRF2P14316 349 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 JUNBP17275 347 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-202ENST00000416769 GTF2A1P52655 376 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-202ENST00000416769 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
LINC00339-202ENST00000416769 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-202ENST00000416769 MALLQ13021 153 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 KLRD1Q13241 179 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 OR8B8Q15620 311 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF367Q7RTV3 350 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 FAM90A1Q86YD7 464 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 PRSS35Q8N3Z0 413 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 OR8B12Q8NGG6 310 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 OR11L1Q8NGX0 322 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 RPS4Y2Q8TD47 263 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 DYRK2Q92630 601 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 MGLLQ99685 303 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
LINC00339-202ENST00000416769 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 DVL1O14640 695 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 IGLV3-1P01715 115 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 TTRP02766 147 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 ISG15P05161 165 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 SELLP14151 372 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 CFL1P23528 166 aaKnown RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 CPT2P23786 658 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF92Q03936 586 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 MLLT11Q13015 90 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 TPBGQ13641 420 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 CDK5R1Q15078 307 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 OR8G1Q15617 311 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 SYT6Q5T7P8 510 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 BCL2L15Q5TBC7 163 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 TMEM244Q5VVB8 128 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 METTL11BQ5VVY1 283 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 DMKNQ6E0U4 476 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 XAF1Q6GPH4 301 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 WDR86Q86TI4 376 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 GCSAMQ8N6F7 178 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 C11orf44Q8N8P7 122 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 MRPS26Q9BYN8 205 aaKnown RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 VCX3AQ9NNX9 186 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 C1orf123Q9NWV4 160 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 RNF7Q9UBF6 113 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 GTF2A1LQ9UNN4 478 aa10.6□□□□□ -0.71
LINC00339-202ENST00000416769 SIRT4Q9Y6E7 314 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-202ENST00000416769 ZNF816-ZNF321PA0A0X1KG74 233 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 CD300LBA8K4G0 201 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 GRPP07492 148 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 HSMCR30P0CW71 290 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 SMIM18P0DKX4 95 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 ATP6V1B1P15313 513 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 CPEP16870 476 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 CELP19835 753 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 PAX6P26367 422 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 DOC2BQ14184 412 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 PDCD1Q15116 288 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 Q6ZPA2 131 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 Q6ZSR3 168 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 PGAP1Q75T13 922 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 FAM216BQ8N7L0 139 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 PLPP7Q8NBV4 271 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 OR5AK2Q8NH90 309 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 TBC1D15Q8TC07 691 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 SMIM19Q96E16 107 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 REEP6Q96HR9 211 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
LINC00339-202ENST00000416769 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms