RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CPEB2Q7Z5Q1 589 aaKnown RBP12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 THNSL2Q86YJ6 484 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 PRR22Q8IZ63 422 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM123Q8N131 208 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 C16orf52Q8NHV5 167 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CCDC163A0A0D9SF12 145 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CDC14CA4D256 554 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 SCGNO76038 276 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR5D14Q8NGL3 314 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 CCDC3Q9BQI4 270 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 PITPNC1Q9UKF7 332 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 B3GALT1Q9Y5Z6 326 aa12.94□□□□□ -0.34
NCKIPSD-204ENST00000416649 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 IGLV1-36A0A0B4J1U3 117 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM14DPA8MWL7 114 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 TNFSF12O43508 249 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 CHRM2P08172 466 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 GSTP1P09211 210 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 HNRNPA2B1P22626 353 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 HOXA6P31267 233 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 ALDH3B1P43353 468 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 RPL27P61353 136 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 RPL23AP62750 156 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR51T1Q8NGJ9 327 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR13D1Q8NGV5 346 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 TM4SF19Q96DZ7 209 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 SCARF2Q96GP6 870 aaPredicted RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 ZFYVE21Q9BQ24 234 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 UNC13CQ8NB66 2214 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM221AA4D161 298 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 K7N7A8 449 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 HCRTR2O43614 444 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 GPR137BO60478 399 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 CDC14BO60729 498 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 WISP1O95388 367 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 NPSP0C0P6 89 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 MMP9P14780 707 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 FOXL2P58012 376 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 RAB11AP62491 216 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 DNLZQ5SXM8 178 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 C1orf189Q5VU69 101 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM180AQ6UWF9 173 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 FBXW12Q6X9E4 464 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 LYZL2Q7Z4W2 148 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 LHFPL1Q86WI0 220 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 PRSS58Q8IYP2 241 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC35G3Q8N808 338 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 VN1R1Q9GZP7 353 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
NCKIPSD-204ENST00000416649 A0A087WWC5 75 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 NSG1A0A0A6YYJ2 146 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM221BA6H8Z2 402 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SCDO00767 359 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 IL18BPO95998 194 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR4A8P0C604 315 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 FZD2Q14332 565 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC22A18ASQ8N1D0 253 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 GPR137CQ8N3F9 429 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR51E1Q8TCB6 317 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 ARV1Q9H2C2 271 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 M0R143 59 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 DVL1O14640 695 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 DFFBO76075 338 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 BGLAPP02818 100 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 RPL29P47914 159 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 FXYD4P59646 89 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SUMF1Q8NBK3 374 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 NECAP1Q8NC96 275 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 DAZLQ92904 295 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 FAM71F1Q96KD3 344 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 CEACAM18A8MTB9 384 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 PAX1P15863 534 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 ATP6V0CP27449 155 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 BLVRBP30043 206 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SUCLG1P53597 346 aaKnown RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 HLA-DRB3P79483 266 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 BEND2Q8NDZ0 799 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 OR52M1Q8NGK5 317 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 OPN3Q9H1Y3 402 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 SUSD2Q9UGT4 822 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 TUBD1Q9UJT1 453 aa12.92□□□□□ -0.34
NCKIPSD-204ENST00000416649 TGFBR3LH3BV60 316 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 FOXS1O43638 330 aa12.91□□□□□ -0.34
NCKIPSD-204ENST00000416649 TTRP02766 147 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms