RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ACTC1P68032 377 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRPS22P82650 360 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 RAD51Q06609 339 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 DMC1Q14565 340 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 SHHQ15465 462 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 FAM78AQ5JUQ0 283 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 C9orf64Q5T6V5 341 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 HES5Q5TA89 166 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 OGFRL1Q5TC84 451 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 LCN8Q6JVE9 175 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCIMPQ6UWF3 145 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 HDDC2Q7Z4H3 204 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF547Q8IVP9 402 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 STK40Q8N2I9 435 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 BBS5Q8N3I7 341 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 TRAM1L1Q8N609 369 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 NOXO1Q8NFA2 376 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 DDI1Q8WTU0 396 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PYDC1Q8WXC3 89 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 FRZBQ92765 325 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 FGF13Q92913 245 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCDC124Q96CT7 223 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 OTUB2Q96DC9 234 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 CCDC126Q96EE4 140 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PIK3IP1Q96FE7 263 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 RILPQ96NA2 401 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR4K3Q96R72 315 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 C1orf50Q9BV19 199 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 BBS2Q9BXC9 721 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 RSPO3Q9BXY4 272 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ILKAPQ9H0C8 392 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PARP12Q9H0J9 701 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PRO3102Q9H379 93 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 RPF2Q9H7B2 306 aaKnown RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 RDH14Q9HBH5 336 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZDHHC4Q9NPG8 344 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 ISYNA1Q9NPH2 558 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 TAS2R13Q9NYV9 303 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSG8Q9UQ74 426 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 POLR3HQ9Y535 204 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 LRRC42Q9Y546 428 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 TIMM22Q9Y584 194 aa2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 NUP214P35658 2090 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P11-201ENST00000413899 BRWD1Q9NSI6 2320 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 KIAA1549Q9HCM3 1950 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 LOC100653049A0A140TA62 436 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NCF1BA6NI72 391 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 BBIP1A8MTZ0 92 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF705GA8MUZ8 300 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NCF1CA8MVU1 366 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 C4orf51C9J302 202 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 E7EQ34 232 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSMD11O00231 422 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSMD12O00232 456 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 UPK1AO00322 258 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 MANBAO00462 879 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 AIM2O14862 343 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBDO15205 165 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 MRPS12O15235 138 aaKnown RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 RAD51BO15315 384 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NVLO15381 856 aaKnown RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 SCN2BO60939 215 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 FKBP6O75344 327 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 KRT34O76011 436 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 SLC25A14O95258 325 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 RAB3DO95716 219 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 LINC00032P0C843 101 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 MPC1LP0DKB6 136 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 GFAPP14136 432 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZNF7P17097 686 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NCF2P19878 526 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 IMPA1P29218 277 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CDKN2CP42773 168 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NSG1P42857 185 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR4D2P58180 307 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PSME3P61289 254 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 RPL38P63173 70 aaKnown RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 APOFQ13790 326 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ZMYND11Q15326 602 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 HNRNPA1L2Q32P51 320 aaKnown RBP2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 ABCA11PQ4W5N1 156 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 COQ5Q5HYK3 327 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CDKL4Q5MAI5 379 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 TPRG1LQ5T0D9 272 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 LPCAT4Q643R3 524 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 NANOGP8Q6NSW7 305 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 IZUMO2Q6UXV1 221 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 CERS6Q6ZMG9 384 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 TEX43Q6ZNM6 134 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 BIVMQ86UB2 503 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 RIMKLAQ8IXN7 391 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 UBALD2Q8IYN6 164 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 HSD17B11Q8NBQ5 300 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR56A4Q8NGH8 313 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR13C2Q8NGS9 318 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR10R2Q8NGX6 335 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 OR5W2Q8NH69 310 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 PLPPR1Q8TBJ4 325 aa2.13□□□□□ -2.07
HMGB1P11-201ENST00000413899 STAG3L4Q8TBR4 150 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms