RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TMEM150BA6NC51 233 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 MAGEA3P43357 314 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 TUFMP49411 452 aaKnown RBP2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ACOT2P49753 483 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 XKP51811 444 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 OR2B6P58173 313 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 FBXL19-AS1Q494R0 122 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 HBMQ6B0K9 141 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZNF101Q8IZC7 436 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 GAPTQ8N292 157 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZNF709Q8N972 641 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZNF420Q8TAQ5 688 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZFP3Q96NJ6 502 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 QKIQ96PU8 341 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 ACBD6Q9BR61 282 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 CYTL1Q9NRR1 136 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 DNAJC27Q9NZQ0 273 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 GMEB1Q9Y692 573 aa2.86□□□□□ -1.95
HMGB3P31-201ENST00000413333 LOXHD1Q8IVV2 1947 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 PLA2R1Q13018 1463 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 SLIT3O75094 1523 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 BTNL10A8MVZ5 291 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 A8MWL6 223 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 TNFAIP8O95379 198 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 FADS2O95864 444 aaKnown RBP2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 OR4Q2P0C623 313 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 TAC1P20366 129 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 RAB38P57729 211 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 TRAM1Q15629 374 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 TRIP13Q15645 432 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 ACTBL2Q562R1 376 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 ITPRIPQ8IWB1 547 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 LRRC52Q8N7C0 313 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 ORAOV1Q8WV07 137 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 BLNKQ8WV28 456 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 RTN4IP1Q8WWV3 396 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZMYND19Q96E35 227 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 SPACA5Q96QH8 159 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 SPACA1Q9HBV2 294 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 SDHAF3Q9NRP4 125 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 MAT2BQ9NZL9 334 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 INSIG2Q9Y5U4 225 aa2.85□□□□□ -1.95
HMGB3P31-201ENST00000413333 IGKV1-6A0A0C4DH72 117 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 TMEM72A0PK05 275 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 GOLGA8IPA6NC78 632 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 RBFOX3A6NFN3 312 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 TRPC5OSA6NMA1 111 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 COLCA2A8K830 154 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 IQCF5A8MTL0 148 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 RNASEK-C17orf49H0YIS7 233 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 PLPP3O14495 311 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 SHOX2O60902 331 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 WISP3O95389 354 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 SYT1P21579 422 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 MAGEA6P43360 314 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 ELF3P78545 371 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 TPBGQ13641 420 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 CEACAM16Q2WEN9 425 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZNF470Q6ECI4 717 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 Q6ZT83 130 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 PRNTQ86SH4 94 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 CYP4Z1Q86W10 505 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 STK40Q8N2I9 435 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 C17orf78Q8N4C9 275 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 TMEM105Q8N8V8 129 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 OR2Y1Q8NGV0 311 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 OR2AE1Q8NHA4 323 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 NELFBQ8WX92 580 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 OR5P2Q8WZ92 322 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 GTF2H4Q92759 462 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 YIPF6Q96EC8 236 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 DERL3Q96Q80 235 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 NDEL1Q9GZM8 345 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 NXF2Q9GZY0 626 aaKnown RBP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 ZSCAN16Q9H4T2 348 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 ABCB9Q9NP78 766 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 RBM22Q9NW64 420 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 CD300AQ9UGN4 299 aa2.84□□□□□ -1.95
HMGB3P31-201ENST00000413333 ELP1O95163 1332 aa2.84□□□□□ -1.96
HMGB3P31-201ENST00000413333 TRAV40A0A0B4J280 105 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 SGCEO43556 437 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 OR2A4O95047 310 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 RCBTB2O95199 551 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 IGKV5-2P06315 115 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 SEC11BP0C7V7 166 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 ZNF286BP0CG31 522 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 NELFEP18615 380 aaKnown RBP2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 UGT2B10P36537 528 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 TGFBR1P36897 503 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 SLC18A1P54219 525 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 CCL23P55773 120 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 PRKCDQ05655 676 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 BTN1A1Q13410 526 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 FLOT2Q14254 428 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 BSXQ3C1V8 233 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
HMGB3P31-201ENST00000413333 KCTD16Q68DU8 428 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms