RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-230	ENST00000412274	LRRC36	Q1X8D7	754 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	FIP1L1	Q6UN15	594 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	LHFPL2	Q6ZUX7	228 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	SIGLECL1	Q8N7X8	197 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	ZDHHC22	Q8N966	263 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	OR5D14	Q8NGL3	314 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	APH1B	Q8WW43	257 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	CYGB	Q8WWM9	190 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	SLC25A28	Q96A46	364 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	AMBN	Q9NP70	447 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	CHCHD3	Q9NX63	227 aa	Known RBP	13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	AASS	Q9UDR5	926 aa		13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	CAB39	Q9Y376	341 aa	Predicted RBP	13.38	□□□□□ -0.27
DDR1-230	ENST00000412274	RFPL4A	A6NLU0	287 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	RFPL4AL1	F8VTS6	287 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	SYNGR1	O43759	233 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	WBP4	O75554	376 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	FCN3	O75636	299 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	ATF1	P18846	271 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	MYL12A	P19105	171 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	COMP	P49747	757 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	ACTG1	P63261	375 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	ADARB1	P78563	741 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	DGUOK	Q16854	277 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	CALHM1	Q8IU99	346 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	SERPINA12	Q8IW75	414 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	RDH10	Q8IZV5	341 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	OR13C3	Q8NGS6	347 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	OR5AK2	Q8NH90	309 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	H1FX	Q92522	213 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	FGGY	Q96C11	551 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	CPNE2	Q96FN4	548 aa	Predicted RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	CEP19	Q96LK0	163 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	TBX15	Q96SF7	602 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	ZNF649	Q9BS31	505 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	UNKL	Q9H9P5	680 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	MAB21L2	Q9Y586	359 aa		13.37	□□□□□ -0.27
DDR1-230	ENST00000412274	DNHD1	Q96M86	4753 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	CENPVL3	A0A0U1RRI6	287 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	hCG_1809904	A0A1W2PP81	198 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274		A0A1W2PPE2	198 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274		A0A1W2PR64	198 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274		A0A1W2PRV1	198 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	CHRM2	P08172	466 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	PEX2	P28328	305 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	CAPG	P40121	348 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	MTCP1	P56278	107 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	SRSF2	Q01130	221 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	DMRTC1	Q5HYR2	192 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	NCR3LG1	Q68D85	454 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	RPL22L1	Q6P5R6	122 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	ANGPTL5	Q86XS5	388 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	BCL6B	Q8N143	479 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	TMEM86B	Q8N661	226 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	TMEM185A	Q8NFB2	350 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	ADAT3	Q96EY9	351 aa	Predicted RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	METTL8	Q9H825	291 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	ISG20L2	Q9H9L3	353 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	ONECUT1	Q9UBC0	465 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	GLS2	Q9UI32	602 aa		13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	DIMT1	Q9UNQ2	313 aa	Known RBP	13.36	□□□□□ -0.27
DDR1-230	ENST00000412274	IGHV1-69D	A0A0B4J2H0	117 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	TRBV2	A0A0J9YWF9	115 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274		A0A1B0GW55	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274		A0A1W2PQ09	198 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	TMEM89	A2RUT3	159 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	EFCAB10	A6NFE3	127 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	RGS9	O75916	674 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	IGHV1-69	P01742	117 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	SFTPB	P07988	381 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L2	P0CJ85	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L3	P0CJ86	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L4	P0CJ87	422 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L5	P0CJ88	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L6	P0CJ89	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L7	P0CJ90	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	EEF1B2	P24534	225 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	AZGP1	P25311	298 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	CAPZA1	P52907	286 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	VMO1	Q7Z5L0	202 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	ZNRF1	Q8ND25	227 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	OR5D13	Q8NGL4	314 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	GCDH	Q92947	438 aa	Predicted RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	LHX4	Q969G2	390 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	ZDHHC16	Q969W1	377 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	TMEM80	Q96HE8	168 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	OPALIN	Q96PE5	141 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	ZCCHC4	Q9H5U6	513 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	ESM1	Q9NQ30	184 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	CNOT2	Q9NZN8	540 aa	Known RBP	13.35	□□□□□ -0.27
DDR1-230	ENST00000412274	DUX4	Q9UBX2	424 aa		13.35	□□□□□ -0.27
DDR1-230	ENST00000412274		H0YJX3	145 aa		13.34	□□□□□ -0.27
DDR1-230	ENST00000412274		H3BSH0	61 aa		13.34	□□□□□ -0.27
DDR1-230	ENST00000412274	ZFPL1	O95159	310 aa		13.34	□□□□□ -0.27

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