RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 MAGEB3O15480 346 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 FOXH1O75593 365 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 HCKP08631 526 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 DVL1P1P54792 670 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 PPP3R1P63098 170 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ACSM3Q53FZ2 586 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ARMCX4Q5H9R4 360 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 FAM166AQ6J272 317 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ACP7Q6ZNF0 438 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 RNF144BQ7Z419 303 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 SAXO1Q8IYX7 474 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZSCAN4Q8NAM6 433 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 OR8B3Q8NGG8 313 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ANGPTL6Q8NI99 470 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ORAI1Q96D31 301 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 CEP19Q96LK0 163 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZNF488Q96MN9 340 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 SPACA5Q96QH8 159 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 OR8B2Q96RD0 313 aa12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-203ENST00000411973 SVEP1Q4LDE5 3571 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 TRAV20A0A0B4J274 112 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 PPIAL4CA0A0B4J2A2 164 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 A0A1W2PPK0 400 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 KIAA1324LA8MWY0 1029 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 ADAM20O43506 726 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 CYB5AP00167 134 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 AMY2BP19961 511 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZFP36P26651 326 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 BDKRB2P30411 391 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 GABRA5P31644 462 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 PITPNBP48739 271 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 POU3F4P49335 361 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 NPY4RP50391 375 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZP1P60852 638 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 GMFBP60983 142 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 SEC61A1P61619 476 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 Q8IYB0 196 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 OR52N4Q8NGI2 321 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 SLAMF9Q96A28 289 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 TMEM186Q96B77 213 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 SSBP3Q9BWW4 388 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 RHOFQ9HBH0 211 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 CTSZQ9UBR2 303 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZNF222Q9UK12 451 aa12.86□□□□□ -0.35
TRAPPC12-203ENST00000411973 NIPBLQ6KC79 2804 aaeCLIP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 IGKV1D-17A0A075B6S4 117 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 TRAV8-7A0A075B6U6 113 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 A8MV72 311 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 F8VVB4 439 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 F8VWA3 439 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 TMPRSS2O15393 492 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 SPRY1O43609 319 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 NXPH2O95156 264 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 PLATP00750 562 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 PSG2P11465 335 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 RPS25P62851 125 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 INSL4Q14641 139 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 SSX1Q16384 188 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 WDR25Q64LD2 544 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 TMEM91Q6ZNR0 172 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 ZNF788Q6ZQV5 615 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 Q71RC1 249 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 SLC36A1Q7Z2H8 476 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 CEACAM19Q7Z692 300 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 GLCCI1Q86VQ1 547 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 CDH26Q8IXH8 852 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 OR5T2Q8NGG2 359 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 CCL13Q99616 98 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 NDUFB11Q9NX14 153 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 CLN8Q9UBY8 286 aa12.85□□□□□ -0.35
TRAPPC12-203ENST00000411973 IGKV1-12A0A0C4DH73 117 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 TRAPPC2LH3BP13 241 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 PHF1O43189 567 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 KDM4BO94953 1096 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 INMTO95050 263 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 KNG1P01042 644 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 UCHL1P09936 223 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 NPBWR2P48146 333 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 GP2P55259 537 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 GNB2P62879 340 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 LCN2P80188 198 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 DDI2Q5TDH0 399 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 ASCL4Q6XD76 172 aa12.84□□□□□ -0.35
TRAPPC12-203ENST00000411973 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms