RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ADIGQ0VDE8 80 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 HADHQ16836 314 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 FBXL19-AS1Q494R0 122 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 FAM229BQ4G0N7 80 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 FAM201AQ5SY85 155 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 MLIPQ5VWP3 458 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 TMEM107Q6UX40 140 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC16A14Q7RTX9 510 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF738Q8NE65 137 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR9G4Q8NGQ1 327 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR51F2Q8NH61 342 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 C2orf15Q8WU43 125 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 BAALCQ8WXS3 180 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 RAB1CQ92928 201 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 MRPL48Q96GC5 212 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 UBE2E2Q96LR5 201 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 TIMM21Q9BVV7 248 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC19A3Q9BZV2 496 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR2D2Q9H210 308 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 PORCNQ9H237 461 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 TDRD3Q9H7E2 651 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 RHOFQ9HBH0 211 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 TREX1Q9NSU2 369 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 HYPKQ9NX55 129 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 VAX2Q9UIW0 290 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 ISY1Q9ULR0 285 aaKnown RBP-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 AP1M2Q9Y6Q5 423 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 BRWD1Q9NSI6 2320 aa-0.31□□□□□ -2.46
RNU2-55P-201ENST00000411146 DMBT1Q9UGM3 2413 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 TRBV24-1A0A075B6N3 115 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 GMNCA6NCL1 334 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 H0YCG3 227 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 GMFGO60234 142 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 DHRS3O75911 302 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 RHOCP08134 193 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 KRTAP2-3P0C7H8 128 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 GABRA1P14867 456 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 INPP1P49441 399 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 NUDT2P50583 147 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 TAF7Q15545 349 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF791Q3KP31 576 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SPIN4Q56A73 249 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 TIMM23BQ5SRD1 257 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 CCDC183Q5T5S1 534 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 C16orf87Q6PH81 154 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 VN1R4Q7Z5H5 301 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 MARCH3Q86UD3 253 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 FAM9BQ8IZU0 186 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR10P1Q8NGE3 313 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR56A4Q8NGH8 313 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR4A4PQ8NGN8 299 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR5H2Q8NGV7 314 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 CLDN23Q96B33 292 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 TMIGD2Q96BF3 282 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 DDIT4LQ96D03 193 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SMARCD1Q96GM5 515 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 PRRC1Q96M27 445 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SPACA5Q96QH8 159 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC39A3Q9BRY0 314 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 KRTAP2-4Q9BYR9 128 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 KRTAP2-1Q9BYU5 128 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 API5Q9BZZ5 524 aaKnown RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC7A5P2Q9GIP4 190 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SRRQ9GZT4 340 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 RSPH9Q9H1X1 276 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 CLN6Q9NWW5 311 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 CYB5R1Q9UHQ9 305 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 KLK5Q9Y337 293 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 SOX21Q9Y651 276 aaPredicted RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZNF780BQ9Y6R6 833 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 URGCP-MRPS24S4R325 110 aa-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 TNRC6AQ8NDV7 1962 aaKnown RBP-0.32□□□□□ -2.46
RNU2-55P-201ENST00000411146 CUL9Q8IWT3 2517 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TRBV9A0A0B4J1U6 114 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TRAV8-6A0A0B4J262 113 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TSPAN11A1L157 253 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 PLPP3O14495 311 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 NDUFAB1O14561 156 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 RGS5O15539 181 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 PTTG1O95997 202 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 IGKV2D-40P01614 121 aaPredicted RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR4Q2P0C623 313 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 OR12D1P0DN82 309 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 CPMP14384 443 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 HLA-GP17693 338 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TNNI1P19237 187 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 IL24Q13007 206 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TRMT5Q32P41 509 aaKnown RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 PRAMEF5Q5TYX0 476 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 PRAMEF6Q5VXH4 476 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 SLC30A8Q8IWU4 369 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 ZIC4Q8N9L1 334 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 EIF1ADQ8N9N8 165 aaKnown RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 ASZ1Q8WWH4 475 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 SYAP1Q96A49 352 aaPredicted RBP-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 CAPZA3Q96KX2 299 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 Q96MT0 163 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 ODF3Q96PU9 254 aa-0.33□□□□□ -2.46
RNU2-55P-201ENST00000411146 TMEM175Q9BSA9 504 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms