RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 RBMXP38159 391 aaKnown RBP13.8□□□□□ -0.2
HOXD3-202ENST00000410016 PSG4Q00888 419 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 SCRN3Q0VDG4 424 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 IAH1Q2TAA2 248 aaPredicted RBP13.8□□□□□ -0.2
HOXD3-202ENST00000410016 UBALD2Q8IYN6 164 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 OR10Z1Q8NGY1 313 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 FGFBP3Q8TAT2 258 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 KCNE4Q8WWG9 221 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 ARL11Q969Q4 196 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 ALKBH3Q96Q83 286 aaPredicted RBP13.8□□□□□ -0.2
HOXD3-202ENST00000410016 SULT4A1Q9BR01 284 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 OR2S2Q9NQN1 319 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 SLC39A1Q9NY26 324 aa13.8□□□□□ -0.2
HOXD3-202ENST00000410016 LRRC3CA6NJW4 275 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 NUDT19A8MXV4 375 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 CHATP28329 748 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 OPRM1P35372 400 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 RBP2P50120 134 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 S100A10P60903 97 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 SGPP2Q8IWX5 399 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 CLRN3Q8NCR9 226 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 OR14L1PQ8NHC6 308 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 MMP26Q9NRE1 261 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 TUBD1Q9UJT1 453 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 PADI1Q9ULC6 663 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 MEMO1Q9Y316 297 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 ARID1AO14497 2285 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 KIAA1549Q9HCM3 1950 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 CXCL13O43927 109 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 P04436 131 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 DTYMKP23919 212 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 RPS18P62269 152 aaKnown RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 CNN3Q15417 329 aaKnown RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 RPL7L1Q6DKI1 246 aaKnown RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 OR2A2Q6IF42 318 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 AAED1Q7RTV5 226 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 WNT2BQ93097 391 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 SMIM8Q96KF7 97 aa13.79□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF629Q9UEG4 869 aaPredicted RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 PURGQ9UJV8 347 aaKnown RBP13.79□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF705EA8MWA4 302 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 TAAR5O14804 337 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 NRASP01111 189 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 PDGFBP01127 241 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 FCGR3AP08637 254 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 RGS19P49795 217 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 FAM3AP98173 230 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF528Q3MIS6 628 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 ABLIM2Q6H8Q1 611 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 SVBPQ8N300 66 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 FOXB1Q99853 325 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 CMSS1Q9BQ75 279 aaKnown RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 WNT5BQ9H1J7 359 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 GEMIN2O14893 280 aaKnown RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF205O95201 554 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 HTR5AP47898 357 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 GGNBP1Q5YKI7 109 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 LHFPL2Q6ZUX7 228 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 ZNF100Q8IYN0 542 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 OR10AD1Q8NGE0 317 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 OR10D3Q8NH80 312 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 MRPL24Q96A35 216 aaKnown RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 SAT2Q96F10 170 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 CPNE2Q96FN4 548 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 MARS2Q96GW9 593 aaKnown RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 OR2H1Q9GZK4 316 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 TLNRD1Q9H1K6 362 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
HOXD3-202ENST00000410016 CARHSP1Q9Y2V2 147 aaKnown RBP13.78□□□□□ -0.2
HOXD3-202ENST00000410016 hCG_38984A0A1B0GV85 526 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 DEDDO75618 318 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 H2AFB1P0C5Y9 115 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 PIGPP57054 158 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF92Q03936 586 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 PJVKQ0ZLH3 352 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 CEACAM16Q2WEN9 425 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 RIPPLY2Q5TAB7 128 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 H3F3CQ6NXT2 135 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 IL34Q6ZMJ4 242 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 FNDC9Q8TBE3 224 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 DYRK2Q92630 601 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 TAF9BQ9HBM6 251 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF391Q9UJN7 358 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 WDFY4Q6ZS81 3184 aa13.77□□□□□ -0.21
HOXD3-202ENST00000410016 NDUFA2O43678 99 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 LRP3O75074 770 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 RCC1P18754 421 aaPredicted RBP13.76□□□□□ -0.21
HOXD3-202ENST00000410016 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms