RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FUT6P51993 359 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 DLX1P56177 255 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 PRB3Q04118 309 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 FDX2Q6P4F2 183 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 OR2G2Q8NGZ5 317 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 DYRK2Q92630 601 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 S100A14Q9HCY8 104 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 EXOGQ9Y2C4 368 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 GMPPBQ9Y5P6 360 aa16.07■□□□□ 0.16
TSPAN4-209ENST00000409543 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 KNG1P01042 644 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 ISG15P05161 165 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 FBP1P09467 338 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 GABRB1P18505 474 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 OMGP23515 440 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 UBE2E1P51965 193 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 KLRD1Q13241 179 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 TMEM244Q5VVB8 128 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 RDH10Q8IZV5 341 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 FAM185AQ8N0U4 392 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 ACBD7Q8N6N7 88 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 OR4F5Q8NH21 305 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 PP6455Q8WZ26 134 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 SLITRK2Q9H156 845 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 DPAGT1Q9H3H5 408 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 C19orf12Q9NSK7 152 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 C1RLQ9NZP8 487 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 FRRS1LQ9P0K9 344 aa16.06■□□□□ 0.16
TSPAN4-209ENST00000409543 IGKV1-27A0A075B6S5 117 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 H0YAE9 185 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 MPZL2O60487 215 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 NDUFA7O95182 113 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 CEBPDP49716 269 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 RAG2P55895 527 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 OR12D2P58182 307 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 RPL31P62899 125 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 ACSM1Q08AH1 577 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 BATF2Q8N1L9 274 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 PQLC1Q8N2U9 271 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 DNAAF1Q8NEP3 725 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 LGALS12Q96DT0 336 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 CEP19Q96LK0 163 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 SLC29A1Q99808 456 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 FAM234AQ9H0X4 552 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 BEX1Q9HBH7 125 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 MTCH1Q9NZJ7 389 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 AASSQ9UDR5 926 aa16.05■□□□□ 0.16
TSPAN4-209ENST00000409543 A0A1W2PPH5 198 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 A0A1W2PRD5 423 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 A0A1W2PRF3 423 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 A0A1W2PRM7 423 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 GPR137BO60478 399 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 TK1P04183 234 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 SAA4P35542 130 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 CCR9P51686 369 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 NANOS3P60323 173 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 ACTA2P62736 377 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 ACTG2P63267 376 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 RELBQ01201 579 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 CNN3Q15417 329 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 TMEM200BQ69YZ2 307 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 ZBTB49Q6ZSB9 765 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 EGFL6Q8IUX8 553 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 ENTHD1Q8IYW4 607 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 RHOXF1Q8NHV9 184 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 BORCS8Q96FH0 119 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 MRPL48Q96GC5 212 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 Q96MT0 163 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 MYCBPQ99417 103 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 ZNRD1Q9P1U0 126 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 OR14J1Q9UGF5 321 aa16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 SF3B6Q9Y3B4 125 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-209ENST00000409543 MEIOCA2RUB1 952 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 J3QLW9 94 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 SPRY1O43609 319 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 HTR1AP08908 422 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 DBTP11182 482 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 ZNF19P17023 458 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 ZNF91Q05481 1191 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 HCP5Q6MZN7 132 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 SLC25A26Q70HW3 274 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 UTS2BQ765I0 119 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 PNKDQ8N490 385 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 SLAMF9Q96A28 289 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 ADAT3Q96EY9 351 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 PELI1Q96FA3 418 aa16.03■□□□□ 0.16
TSPAN4-209ENST00000409543 MGAM2Q2M2H8 2515 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 LOC100130705A0A1B0GUX0 176 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 F8VVB4 439 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 F8VWA3 439 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 K7N7A8 449 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 PAHP00439 452 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 CHRM2P08172 466 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 RBP2P50120 134 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 ATP1B3P54709 279 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 GALEQ14376 348 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 TAF9Q16594 264 aa16.02■□□□□ 0.16
TSPAN4-209ENST00000409543 MIDNQ504T8 468 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms