RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TRAPPC2LH3BP13 241 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 SOCS1O15524 211 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 UBBP0CG47 229 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 CCL8P80075 99 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 DGCR2P98153 550 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 IFITM3Q01628 133 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 GUCA2AQ02747 115 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 TAF9Q16594 264 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 ITLN1Q8WWA0 313 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 CXXC4Q9H2H0 198 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 DIABLOQ9NR28 239 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
SHANK2-204ENST00000409530 LRP5LA4QPB2 252 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 METTL21EPA6NDL7 271 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 TMEM235A6NFC5 223 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 HSPB6O14558 160 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 CD3GP09693 182 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 GNB3P16520 340 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 PRKACAP17612 351 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 SCAND1P57086 179 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 SCN1BQ07699 218 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHANK2-204ENST00000409530 BRICD5Q6PL45 260 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 LILRB1Q8NHL6 650 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-204ENST00000409530 SEH1LQ96EE3 360 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 MEIOCA2RUB1 952 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 J3QT63 122 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 M0R233 179 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 GEMIN2O14893 280 aaKnown RBP13.28□□□□□ -0.28
SHANK2-204ENST00000409530 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 GTF2F2P13984 249 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
SHANK2-204ENST00000409530 OLFML2AQ68BL7 652 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 OR2W3Q7Z3T1 314 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 ZNF554Q86TJ5 538 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 MOGAT3Q86VF5 341 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 AQP3Q92482 292 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 EMG1Q92979 244 aaKnown RBP13.28□□□□□ -0.28
SHANK2-204ENST00000409530 C1orf123Q9NWV4 160 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 ST3GAL6Q9Y274 331 aa13.28□□□□□ -0.28
SHANK2-204ENST00000409530 WNT9BO14905 357 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 TMEM127O75204 238 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 LOXP28300 417 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-204ENST00000409530 PTH2RP49190 550 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 TNFAIP6P98066 277 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-204ENST00000409530 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-204ENST00000409530 TRIQKQ629K1 86 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 DCDC5Q6ZRR9 648 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 MKXQ8IYA7 352 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 OSR2Q8N2R0 312 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 URM1Q9BTM9 101 aaKnown RBP13.27□□□□□ -0.28
SHANK2-204ENST00000409530 SLC22A4Q9H015 551 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 TENM4Q6N022 2769 aa13.27□□□□□ -0.28
SHANK2-204ENST00000409530 LRRK2Q5S007 2527 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 A0A1W2PQ09 198 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 XRCC3O43542 346 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 LANCL1O43813 399 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 UPK1BO75841 260 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 ZNF205O95201 554 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 TFF1P04155 84 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 HNRNPCP07910 306 aaKnown RBP eCLIP13.27□□□□□ -0.29
SHANK2-204ENST00000409530 CSF3P09919 207 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 IL7P13232 177 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 RAB6AP20340 208 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 MNDAP41218 407 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 INPP1P49441 399 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 CAPZA1P52907 286 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 STEAP3Q658P3 488 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 MUC15Q8N387 334 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 DYRK2Q92630 601 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 WDR13Q9H1Z4 485 aa13.27□□□□□ -0.29
SHANK2-204ENST00000409530 NOP16Q9Y3C1 178 aaKnown RBP13.27□□□□□ -0.29
SHANK2-204ENST00000409530 A0A1W2PPR1 153 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 WIPF3A6NGB9 483 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 VSTM5A8MXK1 200 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 OR7C1O76099 320 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-204ENST00000409530 NXPH2O95156 264 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 HLA-DQB1P01920 261 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 BLVRBP30043 206 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-204ENST00000409530 APOBEC3AP31941 199 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-204ENST00000409530 TGIF2LYQ8IUE0 185 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 PXT1Q8NFP0 134 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 OR10R2Q8NGX6 335 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 NUDCD2Q8WVJ2 157 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 ARHGAP5-AS1Q96IT6 56 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 MEGF10Q96KG7 1140 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 CMTM3Q96MX0 182 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-204ENST00000409530 UBTD1Q9HAC8 227 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 GHRLQ9UBU3 117 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 OR14J1Q9UGF5 321 aa13.26□□□□□ -0.29
SHANK2-204ENST00000409530 TMEM210A6NLX4 147 aa13.25□□□□□ -0.29
SHANK2-204ENST00000409530 RAB27BO00194 218 aa13.25□□□□□ -0.29
SHANK2-204ENST00000409530 CPT2P23786 658 aa13.25□□□□□ -0.29
SHANK2-204ENST00000409530 SRP9P49458 86 aaKnown RBP13.25□□□□□ -0.29
SHANK2-204ENST00000409530 CEBPDP49716 269 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms