RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 GPX7Q96SL4 187 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 IFNL4K9M1U5 179 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 SRMP19623 302 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 BSGP35613 385 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 SLC37A1P57057 533 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TSEN54Q7Z6J9 526 aaKnown RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 SIAH3Q8IW03 269 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 LAX1Q8IWV1 398 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TMEM217Q8N7C4 229 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TMED6Q8WW62 240 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 NEU4Q8WWR8 484 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 S1PR3Q99500 378 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 RASL11BQ9BPW5 248 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 GPR61Q9BZJ8 451 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 ANKRD19PQ9H560 264 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TUBA4BQ9H853 241 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 OR4A8P0C604 315 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 ASAH1Q13510 395 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 NXNL2Q5VZ03 156 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 RPUSD4Q96CM3 377 aaKnown RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 FYTTD1Q96QD9 318 aaKnown RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 MBOAT4Q96T53 435 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TCHHQ07283 1943 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 H7C1C5 153 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 SOCS6O14544 535 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 RGS13O14921 159 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 GPR37O15354 613 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 SEMA7AO75326 666 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 ETHE1O95571 254 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 CPEP16870 476 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 GSK3AP49840 483 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 AESQ08117 197 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TP53I3Q53FA7 332 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 OTUD1Q5VV17 481 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 DHRS7BQ6IAN0 325 aaPredicted RBP6.49□□□□□ -1.37
SCN9A-202ENST00000409435 GLRX5Q86SX6 157 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 CXorf58Q96LI9 332 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 C1RLQ9NZP8 487 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 WASHC3Q9Y3C0 194 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 KLK4Q9Y5K2 254 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 LOC285556D6RIA3 1793 aa6.49□□□□□ -1.37
SCN9A-202ENST00000409435 B9A039 149 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 CLDN34H7C241 214 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 FBXO45P0C2W1 286 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 COX6A1P12074 109 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 GABRA4P48169 554 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HYAL4Q2M3T9 481 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 SAPCD1Q5SSQ6 148 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 AADACL3Q5VUY0 350 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 FBXW9Q5XUX1 488 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 SBSNQ6UWP8 590 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 EIF4E3Q8N5X7 224 aaKnown RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 CYB561A3Q8NBI2 242 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 OR51A4Q8NGJ6 313 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ZMYND19Q96E35 227 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ACTR3CQ9C0K3 210 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 NXF2Q9GZY0 626 aaKnown RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 PIGLQ9Y2B2 252 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 DOCK3Q8IZD9 2030 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ZDBF2Q9HCK1 2354 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 FBLL1A6NHQ2 334 aaKnown RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 OR4C45A6NMZ5 311 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 RNASEK-C17orf49H0YIS7 233 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 GABRPO00591 440 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 OR2J3O76001 311 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 GABRA5P31644 462 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 CSN1S1P47710 185 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 RTL8BQ17RB0 113 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ZNF691Q5VV52 312 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 SAMD13Q5VXD3 122 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 Q71RC1 249 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 LRP11Q86VZ4 500 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 LINC00346Q8IVM7 164 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 OR4C3Q8NH37 302 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 NRG4Q8WWG1 115 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 DVL3Q92997 716 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 FKBP11Q9NYL4 201 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HHLA2Q9UM44 414 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 MMP24Q9Y5R2 645 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 DNAJC15Q9Y5T4 150 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ACP2P11117 423 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 TAS2R45P59539 299 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HBA1P69905 142 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 CLEC12BQ2HXU8 276 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 BAP18Q8IXM2 172 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 ZDHHC23Q8IYP9 409 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 LGI3Q8N145 548 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 CIB3Q96Q77 187 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 PSMG3Q9BT73 122 aaPredicted RBP6.48□□□□□ -1.37
SCN9A-202ENST00000409435 GAL3ST2Q9H3Q3 398 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 TSPAN13O95857 204 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HAND1O96004 215 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 HAAOP46952 286 aa6.48□□□□□ -1.37
SCN9A-202ENST00000409435 TNFSF10P50591 281 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms